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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3282345 3282345 PRJNA753704_P_NODE_20443_length_269_cov_1.683673_g20082_i0 PRJNA753704 20443 269 1.683673 4.52908037 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 453 5.78e-123   NTclustered gi|347439275|gb|JN111986.1| 151077 g20082 i0 97.026 91.0594795539033 269 8 100 0 1 269 294 26 Chilodonella uncinata strain USA_WH clone SP2 beta tubulin (btub) gene, partial cds; macronuclear blastn 24495 453 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
4559595 4559595 PRJNA753704_P_NODE_30824_length_211_cov_5.115942_g30463_i0 PRJNA753704 30824 211 5.115942 10.79463762 Lembadion sp. FG-2015 1607877 SAR_Eukaryotes SAR_Eukaryotes 311 2.77e-80   NTclustered gi|759083556|gb|KM222173.1| 1607877 g30463 i0 93.333 19.2274881516588 210 14 99 0 2 211 577 368 Lembadion sp. FG-2015 voucher FYB2013031305 large subunit ribosomal RNA gene, partial sequence blastn 4057 311 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion sp. FG-2015
5834800 5834800 PRJNA753704_P_NODE_8085_length_409_cov_8.800595_g7724_i0 PRJNA753704 8085 409 8.800595 35.99443355 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 669 0   NTclustered gi|512134950|gb|JX178909.1| 1295638 g7724 i0 96.324 92.9804400977995 408 14 99 1 3 409 1549 1142 Vorticella sp. 4 JG-2011 clone 9 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 38029 669 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
7109897 7109897 PRJNA753704_P_NODE_666_length_1286_cov_10.092333_g468_i0 PRJNA753704 666 1286 10.092333 129.78740238 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1315 0   NTclustered gi|347439270|gb|JN111983.1| 151077 g468 i0 93.031 18.8646967340591 904 58 70 5 378 1278 1 902 Chilodonella uncinata strain USA_SC2 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 24260 1315 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10130636 10130636 PRJNA753704_P_NODE_11468_length_349_cov_8.775362_g11107_i0 PRJNA753704 11468 349 8.775362 30.62601338 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 634 2.5699999999999996e-177   NTclustered gi|2223186636|gb|MW310239.1| 151077 g11107 i0 99.427 94.0343839541547 349 2 100 0 1 349 361 13 Chilodonella uncinata isolate 20200709 small subunit ribosomal RNA gene, partial sequence blastn 32818 634 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10935079 10935079 PRJNA753704_P_NODE_21949_length_261_cov_1.031915_g21588_i0 PRJNA753704 21949 261 1.031915 2.69329815 Cothurnia sp. 2932382 SAR_Eukaryotes SAR_Eukaryotes 82.4 3.04e-11   NTclustered gi|2392033902|gb|OP962756.1| 2932382 g21588 i0 94.444 19.0459770114943 54 1 20 2 136 187 999 1052 Cothurnia sp. isolate LBR-20170302-01 large subunit ribosomal RNA gene, partial sequence blastn 4971 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vaginicolidae Cothurnia Cothurnia sp.
11405849 11405849 PRJNA753704_P_NODE_20309_length_270_cov_1.558376_g19948_i0 PRJNA753704 20309 270 1.558376 4.2076152 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 278 3.7500000000000005e-70   NTclustered gi|2209090|gb|AF003089.1|AF003089 5919 g19948 i0 85.878 173.588888888889 262 35 97 2 3 263 193 453 Tetrahymena vorax ubiquitin mRNA, complete cds blastn 46869 279 0.996415770609319 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena vorax
13484811 13484811 PRJNA753704_P_NODE_19091_length_277_cov_4.857843_g18730_i0 PRJNA753704 19091 277 4.857843 13.45622511 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 390 4.749999999999999e-104   NTclustered gi|110645063|gb|DQ665311.1| 151077 g18730 i0 96.983 27.3104693140794 232 7 84 0 1 232 232 1 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 7565 390 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13955973 13955973 PRJNA753704_P_NODE_15311_length_306_cov_4.592275_g14950_i0 PRJNA753704 15311 306 4.592275 14.0523615 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.69e-9   NTclustered gi|299830252|ref|NC_014262.1| 5885 g14950 i0 94 0.65359477124183 50 3 16 0 31 80 1441 1490 Paramecium caudatum mitochondrion, complete genome blastn 200 76.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
14759874 14759874 PRJNA753704_P_NODE_13452_length_325_cov_1.801587_g13091_i0 PRJNA753704 13452 325 1.801587 5.85515775 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 568 2.4499999999999992e-157   NTclustered gi|110645063|gb|DQ665311.1| 151077 g13091 i0 98.154 35.9907692307692 325 6 100 0 1 325 1014 690 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 11697 568 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15230519 15230519 PRJNA753704_P_NODE_12412_length_337_cov_2.268939_g12051_i0 PRJNA753704 12412 337 2.268939 7.64632443 Haptorida 5989 SAR_Eukaryotes SAR_Eukaryotes 65.8 4.08e-6   NTclustered gi|1226859313|gb|MF474356.1| 394801 g12051 i0 74.857 12.4480712166172 175 29 51 12 1 172 1176 1338 Lacrymaria marina isolate QZS2013110504 large subunit ribosomal RNA gene, partial sequence blastn 4195 65.8 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Lacrymariidae Lacrymaria Lacrymaria marina
16505021 16505021 PRJNA753704_P_NODE_29773_length_231_cov_2.246835_g29412_i0 PRJNA753704 29773 231 2.246835 5.19018885 Lembadion 54107 SAR_Eukaryotes SAR_Eukaryotes 379 8.339999999999999e-101   NTclustered gi|7839503|gb|AF255358.1| 54108 g29412 i0 96.522 90.6580086580087 230 7 99 1 1 230 177 405 Lembadion bullinum small subunit ribosomal RNA gene, partial sequence blastn 20942 379 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion bullinum
17309286 17309286 PRJNA753704_P_NODE_31314_length_201_cov_4.109375_g30953_i0 PRJNA753704 31314 201 4.109375 8.25984375 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 204 4.5599999999999997e-48   NTclustered gi|759083508|gb|KM222125.1| 1004043 g30953 i0 93.431 68.2587064676617 137 9 68 0 3 139 1148 1284 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 13720 204 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
17309311 17309311 PRJNA753704_P_NODE_5734_length_477_cov_32.215347_g5373_i0 PRJNA753704 5734 477 32.215347 153.66720519 Uronema marinum 35107 SAR_Eukaryotes SAR_Eukaryotes 337 1.1399999999999999e-87   NTclustered gi|1464314795|ref|NC_039174.1| 35107 g5373 i0 82.338 51.0691823899371 402 57 83 11 82 476 7619 8013 Uronema marinum mitochondrion, complete genome blastn 24360 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema marinum
17309351 17309351 PRJNA753704_P_NODE_9354_length_383_cov_3.196774_g8993_i0 PRJNA753704 9354 383 3.196774 12.24364442 Tetrahymena paravorax 5905 SAR_Eukaryotes SAR_Eukaryotes 276 1.99e-69   NTclustered gi|114329857|ref|NC_008338.1| 5905 g8993 i0 80.601 14.0992167101828 366 63 95 6 22 383 11131 11492 Tetrahymena paravorax mitochondrion, complete genome blastn 5400 276 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena paravorax
18583052 18583052 PRJNA753704_P_NODE_6895_length_440_cov_7.667575_g6534_i0 PRJNA753704 6895 440 7.667575 33.73733 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 616 1.2e-171   NTclustered gi|1389870282|gb|MH356267.1| 1654720 g6534 i0 91.928 17.5613636363636 446 26 100 9 1 440 375 816 Chilodonella piscicola strain SC small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 7727 616 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19858217 19858217 PRJNA753704_P_NODE_676_length_1280_cov_18.927920_g478_i0 PRJNA753704 676 1280 18.92792 242.277376 Platyophrya bromelicola 767776 SAR_Eukaryotes SAR_Eukaryotes 1081 0   NTclustered gi|296939569|gb|HM246415.1| 767776 g478 i0 87.054 34.809375 981 97 75 22 22 983 970 1 Platyophrya bromelicola isolate Plbr1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 44556 1081 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Platyophryidae Platyophrya Platyophrya bromelicola
19858228 19858228 PRJNA753704_P_NODE_8356_length_403_cov_17.739394_g7995_i0 PRJNA753704 8356 403 17.739394 71.48975782 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 494 5.34e-135   NTclustered gi|347439269|gb|JN111982.1| 151077 g7995 i0 88.861 18.1637717121588 404 41 100 3 1 403 416 16 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 7320 494 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20328430 20328430 PRJNA753704_P_NODE_14036_length_318_cov_77.665306_g13675_i0 PRJNA753704 14036 318 77.665306 246.97567308 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 231 3.57e-56   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g13675 i0 97.08 1.29245283018868 137 4 43 0 1 137 2946 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 411 231 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
21604309 21604309 PRJNA753704_P_NODE_737_length_1235_cov_608.403614_g520_i0 PRJNA753704 737 1235 608.403614 7513.7846329 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1498 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g520 i0 95.802 45.119028340081 929 37 75 2 2 929 928 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 55722 1498 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22408357 22408357 PRJNA753704_P_NODE_1298_length_956_cov_22.070215_g1004_i0 PRJNA753704 1298 956 22.070215 210.9912554 Tetrahymena paravorax 5905 SAR_Eukaryotes SAR_Eukaryotes 215 1.17e-50   NTclustered gi|114329857|ref|NC_008338.1| 5905 g1004 i0 78.846 6.99163179916318 364 43 36 22 553 896 2895 3244 Tetrahymena paravorax mitochondrion, complete genome blastn 6684 215 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena paravorax
23684134 23684134 PRJNA753704_P_NODE_29239_length_235_cov_5.253086_g28878_i0 PRJNA753704 29239 235 5.253086 12.3447521 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 429 8.33e-116   NTclustered gi|111035921|emb|AJ781306.1| 5908 g28878 i0 99.574 90.8212765957447 235 1 100 0 1 235 317 551 Tetrahymena pyriformis partial 23S rRNA gene, strain CCAP 1630/1W blastn 21343 429 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23684163 23684163 PRJNA753704_P_NODE_3699_length_582_cov_8.227898_g3342_i0 PRJNA753704 3699 582 8.227898 47.88636636 Helicoprorodon maximus 1607784 SAR_Eukaryotes SAR_Eukaryotes 254 1.47e-62   NTclustered gi|759083537|gb|KM222154.1| 1607784 g3342 i0 77.878 55.3264604810997 443 75 75 18 144 581 698 1122 Helicoprorodon maximus voucher XY10100902 large subunit ribosomal RNA gene, partial sequence blastn 32200 254 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Helicoprorodontidae Helicoprorodon Helicoprorodon maximus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;