RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA753704 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12210642 12210642 PRJNA753704_P_NODE_30650_length_215_cov_10.260563_g30289_i0 PRJNA753704 30650 215 10.260563 22.06021045 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 381 2.1299999999999996e-101   NTclustered gi|238617602|gb|FJ973377.1| 188950 g30289 i0 98.611 28.4372093023256 216 2 100 1 1 215 584 369 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 6114 381 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16033558 16033558 PRJNA753704_P_NODE_11193_length_353_cov_8.946429_g10832_i0 PRJNA753704 11193 353 8.946429 31.58089437 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 647 0   NTclustered gi|161015705|gb|EF681939.1| 458867 g10832 i0 99.717 45.4475920679887 353 1 100 0 1 353 531 179 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 16043 647 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
18582874 18582874 PRJNA753704_P_NODE_17635_length_287_cov_3.602804_g17274_i0 PRJNA753704 17635 287 3.602804 10.34004748 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 508 1.31e-139   NTclustered gi|197723521|gb|EF681900.2| 458884 g17274 i0 98.606 11.4738675958188 287 4 100 0 1 287 308 594 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 3293 508 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
21133586 21133586 PRJNA753704_P_NODE_20397_length_269_cov_2.520408_g20036_i0 PRJNA753704 20397 269 2.520408 6.77989752 Cercomonas sp. HFCC548 458873 SAR_Eukaryotes SAR_Eukaryotes 494 3.41e-135   NTclustered gi|161015713|gb|EF681947.1| 458873 g20036 i0 100 96.8029739776952 267 0 99 0 1 267 267 1 Cercomonas sp. HFCC548 28S ribosomal RNA gene, partial sequence blastn 26040 494 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC548
21133752 21133752 PRJNA753704_P_NODE_7497_length_425_cov_2.201705_g7136_i0 PRJNA753704 7497 425 2.201705 9.35724625 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 780 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7136 i0 99.765 87.3011764705882 425 1 100 0 1 425 1730 2154 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 37103 780 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;