RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
731068 731068 PRJNA753704_P_NODE_28381_length_242_cov_0.923077_g28020_i0 PRJNA753704 28381 242 0.923077 2.23384634 Tick-associated circular virus-6 2951488 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2263979298|gb|ON456889.1| 2951488 g28020 i0 100 1 242 0 100 0 1 242 1457 1698 Tick-associated circular virus-6 isolate Tick114CressC11, complete genome blastn 242 448 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae   Tick-associated circular virus-6
9659598 9659598 PRJNA753704_P_NODE_25908_length_247_cov_2.614943_g25547_i0 PRJNA753704 25908 247 2.614943 6.45890921 Sichuan tick-associated circovirus 3 2951470 Viruses Viruses 87.9 6.12e-13   NTclustered gi|2263979276|gb|ON456881.1| 2951470 g25547 i0 93.443 0.45748987854251 61 1 24 3 132 191 2877 2935 Sichuan tick-associated circovirus 3 isolate Tick101/112Circo, complete genome blastn 113 87.9 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Sichuan tick-associated circovirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;