RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4559662 4559662 PRJNA753704_P_NODE_8684_length_396_cov_4.396285_g8323_i0 PRJNA753704 8684 396 4.396285 17.4092886 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 532 1.11e-146   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g8323 i0 91.667 528.752525252525 384 32 97 0 6 389 3497867 3497484 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 209386 532 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
17309084 17309084 PRJNA753704_P_NODE_134_length_2416_cov_43.332480_g75_i0 PRJNA753704 134 2416 43.33248 1046.9127168 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 1670 0   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g75 i0 82.488 118.554635761589 1953 297 99 34 478 2408 3496359 3494430 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 286428 1670 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;