contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA753704" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2007205 | 2007205 | PRJNA753704_P_NODE_6242_length_460_cov_4.387597_g5881_i0 | PRJNA753704 | 6242 | 460 | 4.387597 | 20.1829462 | Paramoeba branchiphila | 308475 | Discosea | other_Eukaryota | 305 | 3.1e-78 | NTclustered | gi|226347442|gb|FJ807261.1| | 308475 | g5881 | i0 | 78.901 | 72.795652173913 | 455 | 90 | 98 | 6 | 9 | 460 | 515 | 966 | Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds | blastn | 33486 | 305 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba branchiphila | ||
| 2007233 | 2007233 | PRJNA753704_P_NODE_9262_length_385_cov_1.839744_g8901_i0 | PRJNA753704 | 9262 | 385 | 1.839744 | 7.0830144 | Paramoeba pemaquidensis | 180228 | Discosea | other_Eukaryota | 121 | 9.93e-23 | NTclustered | gi|1079488025|ref|NC_031417.1| | 180228 | g8901 | i0 | 74.052 | 15.587012987013 | 343 | 68 | 87 | 18 | 52 | 385 | 32816 | 32486 | Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome | blastn | 6001 | 121 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba pemaquidensis | ||
| 3282330 | 3282330 | PRJNA753704_P_NODE_18963_length_278_cov_2.682927_g18602_i0 | PRJNA753704 | 18963 | 278 | 2.682927 | 7.45853706 | Acytostelium subglobosum | 361139 | Evosea | other_Eukaryota | 193 | 1.45e-44 | NTclustered | gi|831791807|ref|XM_012904383.1| | 1410327 | g18602 | i0 | 80 | 1.37769784172662 | 265 | 49 | 95 | 4 | 16 | 278 | 136 | 398 | Acytostelium subglobosum LB1 hypothetical protein partial mRNA | blastn | 383 | 193 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Acytostelium | Acytostelium subglobosum | ||
| 3282520 | 3282520 | PRJNA753704_P_NODE_7803_length_416_cov_6.212828_g7442_i0 | PRJNA753704 | 7803 | 416 | 6.212828 | 25.84536448 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 625 | 1.8799999999999998e-174 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g7442 | i0 | 93.75 | 1 | 416 | 26 | 100 | 0 | 1 | 416 | 199 | 614 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 416 | 625 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5834615 | 5834615 | PRJNA753704_P_NODE_20005_length_271_cov_81.196970_g19644_i0 | PRJNA753704 | 20005 | 271 | 81.19697 | 220.0437887 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 307 | 4.8e-79 | NTclustered | gi|292559443|ref|NC_013986.1| | 5778 | g19644 | i0 | 94.472 | 46.1143911439114 | 199 | 11 | 73 | 0 | 1 | 199 | 27236 | 27038 | Hartmannella vermiformis mitochondrion, complete genome | blastn | 12497 | 307 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 13484819 | 13484819 | PRJNA753704_P_NODE_19611_length_274_cov_1.995025_g19250_i0 | PRJNA753704 | 19611 | 274 | 1.995025 | 5.4663685 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 204 | 6.569999999999999e-48 | NTclustered | gi|909719647|gb|KT185627.1| | 5778 | g19250 | i0 | 80.292 | 1 | 274 | 51 | 99 | 3 | 2 | 274 | 24880 | 25151 | Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome | blastn | 274 | 204 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 13485002 | 13485002 | PRJNA753704_P_NODE_9451_length_381_cov_12.211039_g9090_i0 | PRJNA753704 | 9451 | 381 | 12.211039 | 46.52405859 | uncultured Amoebozoa | 590481 | Root_unresolved | Root_unresolved | 673 | 0 | NTclustered | gi|365928255|gb|JN825705.1| | 590481 | g9090 | i0 | 98.688 | 60.3779527559055 | 381 | 2 | 100 | 3 | 1 | 381 | 665 | 1042 | Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence | blastn | 23004 | 673 | 1 | Eukaryota | Amoebozoa | uncultured Amoebozoa | |||||||
| 16033780 | 16033780 | PRJNA753704_P_NODE_3033_length_638_cov_2.596460_g2680_i0 | PRJNA753704 | 3033 | 638 | 2.59646 | 16.5654148 | Acanthamoeba polyphaga | 5757 | Discosea | other_Eukaryota | 182 | 7.75e-41 | NTclustered | gi|28194599|gb|AF479543.1| | 5757 | g2680 | i0 | 73.045 | 16.1520376175549 | 601 | 128 | 91 | 28 | 56 | 638 | 235 | 819 | Acanthamoeba polyphaga strain Sawyer CCAP 1501/3C 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product | blastn | 10305 | 182 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba polyphaga | |||
| 16033835 | 16033835 | PRJNA753704_P_NODE_7113_length_435_cov_1.781768_g6752_i0 | PRJNA753704 | 7113 | 435 | 1.781768 | 7.7506908 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 599 | 1.1999999999999995e-166 | NTclustered | gi|909719647|gb|KT185627.1| | 5778 | g6752 | i0 | 96.919 | 65.216091954023 | 357 | 11 | 82 | 0 | 1 | 357 | 20630 | 20274 | Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome | blastn | 28369 | 599 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17309096 | 17309096 | PRJNA753704_P_NODE_14654_length_312_cov_6.979079_g14293_i0 | PRJNA753704 | 14654 | 312 | 6.979079 | 21.774726480000002 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 549 | 8.489999999999997e-152 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g14293 | i0 | 98.397 | 26.5865384615385 | 312 | 5 | 100 | 0 | 1 | 312 | 6746 | 7057 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 8295 | 549 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17309106 | 17309106 | PRJNA753704_P_NODE_15314_length_306_cov_4.330472_g14953_i0 | PRJNA753704 | 15314 | 306 | 4.330472 | 13.25124432 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 429 | 1.13e-115 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g14953 | i0 | 91.883 | 1.00653594771242 | 308 | 23 | 100 | 2 | 1 | 306 | 935 | 628 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 308 | 429 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17309158 | 17309158 | PRJNA753704_P_NODE_20534_length_268_cov_7.579487_g20173_i0 | PRJNA753704 | 20534 | 268 | 7.579487 | 20.31302516 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 457 | 4.45e-124 | NTclustered | gi|909719647|gb|KT185627.1| | 5778 | g20173 | i0 | 97.388 | 167.481343283582 | 268 | 7 | 100 | 0 | 1 | 268 | 28352 | 28085 | Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome | blastn | 44885 | 457 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17309326 | 17309326 | PRJNA753704_P_NODE_6934_length_439_cov_7.765027_g6573_i0 | PRJNA753704 | 6934 | 439 | 7.765027 | 34.08846853 | Paramoeba aparasomata | 2583407 | Discosea | other_Eukaryota | 91.6 | 8.99e-14 | NTclustered | gi|1767098935|gb|MK518072.1| | 2583407 | g6573 | i0 | 73.065 | 10.9703872437358 | 323 | 61 | 71 | 16 | 1 | 312 | 14255 | 14562 | Paramoeba aparasomata mitochondrion, complete genome | blastn | 4816 | 91.6 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba aparasomata | ||
| 18583048 | 18583048 | PRJNA753704_P_NODE_6655_length_448_cov_1.288000_g6294_i0 | PRJNA753704 | 6655 | 448 | 1.288 | 5.77024 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 390 | 8.089999999999999e-104 | NTclustered | gi|909719647|gb|KT185627.1| | 5778 | g6294 | i0 | 82.405 | 9.48883928571429 | 449 | 77 | 100 | 2 | 1 | 448 | 1184 | 1631 | Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome | blastn | 4251 | 390 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 21133647 | 21133647 | PRJNA753704_P_NODE_25897_length_247_cov_2.724138_g25536_i0 | PRJNA753704 | 25897 | 247 | 2.724138 | 6.72862086 | uncultured Amoebozoa | 590481 | Root_unresolved | Root_unresolved | 407 | 4.14e-109 | NTclustered | gi|365928255|gb|JN825705.1| | 590481 | g25536 | i0 | 96.371 | 58.502024291498 | 248 | 7 | 100 | 2 | 1 | 247 | 93 | 339 | Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence | blastn | 14450 | 407 | 1 | Eukaryota | Amoebozoa | uncultured Amoebozoa | |||||||
| 21604197 | 21604197 | PRJNA753704_P_NODE_2077_length_754_cov_12.362702_g1745_i0 | PRJNA753704 | 2077 | 754 | 12.362702 | 93.21477308 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 1343 | 0 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g1745 | i0 | 98.806 | 98.0477453580902 | 754 | 9 | 100 | 0 | 1 | 754 | 4885 | 5638 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 73928 | 1343 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 22408445 | 22408445 | PRJNA753704_P_NODE_21138_length_265_cov_1.625000_g20777_i0 | PRJNA753704 | 21138 | 265 | 1.625 | 4.30625 | Amoebozoa sp. Tmp4 | 688093 | Root_unresolved | Root_unresolved | 366 | 7.62e-97 | NTclustered | gi|429836225|emb|HE802057.1| | 688093 | g20777 | i0 | 91.954 | 98.5924528301887 | 261 | 21 | 98 | 0 | 5 | 265 | 894 | 634 | Amoebozoa sp. Tmp4 partial actin gene for actin, isolate Tmp4 | blastn | 26127 | 366 | 1 | Eukaryota | Amoebozoa | Amoebozoa sp. Tmp4 | |||||||
| 25428758 | 25428758 | PRJNA753704_P_NODE_7480_length_425_cov_4.173295_g7119_i0 | PRJNA753704 | 7480 | 425 | 4.173295 | 17.73650375 | Eumycetozoa | 142796 | Evosea | other_Eukaryota | 209 | 2.3e-49 | NTclustered | gi|556912445|gb|KF662130.1| | 142829 | g7119 | i0 | 85.93 | 45.5505882352941 | 199 | 24 | 46 | 4 | 16 | 212 | 533 | 337 | Cavenderia aureostipes isolate KP3 ATPase1 (atp1) gene, partial cds; mitochondrial | blastn | 19359 | 209 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia aureostipes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;