contig_metadata
47 rows where analysis = "blastn", bioproject = "PRJNA753151" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 729388 | 729388 | PRJNA753151_S_NODE_124301_length_258_cov_3.013953_g122011_i0 | PRJNA753151 | 124301 | 258 | 3.013953 | 7.77599874 | Psychrobacter pulmonis | 228654 | Bacteria | Bacteria | 466 | 7.08e-127 | NTclustered | gi|307335077|gb|HM236419.1| | 228654 | g122011 | i0 | 99.225 | 335.62015503876 | 258 | 2 | 100 | 0 | 1 | 258 | 294 | 37 | Psychrobacter pulmonis strain DSM 16214 23S ribosomal RNA gene, partial sequence | blastn | 86590 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter pulmonis | ||
| 2477210 | 2477210 | PRJNA753151_S_NODE_112942_length_269_cov_2.376106_g110652_i0 | PRJNA753151 | 112942 | 269 | 2.376106 | 6.39172514 | Escherichia | 561 | Bacteria | Bacteria | 492 | 1.23e-134 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g110652 | i0 | 99.628 | 100 | 269 | 1 | 100 | 0 | 1 | 269 | 3953498 | 3953230 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 26900 | 492 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2477231 | 2477231 | PRJNA753151_S_NODE_151142_length_236_cov_2.797927_g148852_i0 | PRJNA753151 | 151142 | 236 | 2.797927 | 6.60310772 | Pigmentiphaga | 152267 | Bacteria | Bacteria | 398 | 2.36e-106 | NTclustered | gi|1730283800|gb|CP043046.1| | 1940612 | g148852 | i0 | 97.034 | 298 | 236 | 7 | 100 | 0 | 1 | 236 | 65593 | 65828 | Pigmentiphaga aceris strain Mada1488 chromosome, complete genome | blastn | 70328 | 398 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Pigmentiphaga | Pigmentiphaga aceris | ||
| 2477233 | 2477233 | PRJNA753151_S_NODE_153862_length_234_cov_2.937173_g151572_i0 | PRJNA753151 | 153862 | 234 | 2.937173 | 6.87298482 | Burkholderia | 32008 | Bacteria | Bacteria | 433 | 6.41e-117 | NTclustered | gi|2694723970|gb|CP146376.1| | 60550 | g151572 | i0 | 100 | 216.055555555556 | 234 | 0 | 100 | 0 | 1 | 234 | 3487060 | 3487293 | Burkholderia pyrrocinia strain JBC226 chromosome 1, complete sequence | blastn | 50557 | 433 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia pyrrocinia | ||
| 2477236 | 2477236 | PRJNA753151_S_NODE_155042_length_233_cov_3.805263_g152752_i0 | PRJNA753151 | 155042 | 233 | 3.805263 | 8.86626279 | Pseudoxanthomonas | 83618 | Bacteria | Bacteria | 431 | 2.2899999999999996e-116 | NTclustered | gi|2222675374|gb|CP095186.1| | 128785 | g152752 | i0 | 100 | 290.004291845494 | 233 | 0 | 100 | 0 | 1 | 233 | 2116446 | 2116678 | Pseudoxanthomonas mexicana strain F31 chromosome, complete genome | blastn | 67571 | 431 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas mexicana | ||
| 2477261 | 2477261 | PRJNA753151_S_NODE_196222_length_206_cov_3.865031_g193932_i0 | PRJNA753151 | 196222 | 206 | 3.865031 | 7.96196386 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 375 | 9.41e-100 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g193932 | i0 | 99.515 | 100 | 206 | 1 | 100 | 0 | 1 | 206 | 3513661 | 3513866 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 20600 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2477271 | 2477271 | PRJNA753151_S_NODE_223062_length_192_cov_1.510067_g220772_i0 | PRJNA753151 | 223062 | 192 | 1.510067 | 2.89932864 | Escherichia | 561 | Bacteria | Bacteria | 355 | 1.13e-93 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g220772 | i0 | 100 | 100 | 192 | 0 | 100 | 0 | 1 | 192 | 4196868 | 4197059 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19200 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2477279 | 2477279 | PRJNA753151_S_NODE_237542_length_185_cov_1.267606_g235252_i0 | PRJNA753151 | 237542 | 185 | 1.267606 | 2.3450711 | Escherichia | 561 | Bacteria | Bacteria | 342 | 8.369999999999999e-90 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g235252 | i0 | 100 | 100 | 185 | 0 | 100 | 0 | 1 | 185 | 1282357 | 1282541 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18500 | 342 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3753543 | 3753543 | PRJNA753151_S_NODE_166883_length_225_cov_1.972527_g164593_i0 | PRJNA753151 | 166883 | 225 | 1.972527 | 4.43818575 | Burkholderia | 32008 | Bacteria | Bacteria | 405 | 1.33e-108 | NTclustered | gi|1147668853|gb|KY621357.1| | 292 | g164593 | i0 | 99.111 | 176.008888888889 | 225 | 2 | 100 | 0 | 1 | 225 | 43 | 267 | Burkholderia cepacia strain S409 23S ribosomal RNA gene, partial sequence | blastn | 39602 | 405 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia cepacia | ||
| 3753558 | 3753558 | PRJNA753151_S_NODE_19643_length_507_cov_5.808190_g17565_i0 | PRJNA753151 | 19643 | 507 | 5.80819 | 29.4475233 | Aggregatibacter | 416916 | Bacteria | Bacteria | 754 | 0 | NTclustered | gi|1403670283|emb|LS483485.1| | 732 | g17565 | i0 | 93.529 | 574.226824457594 | 510 | 27 | 100 | 6 | 1 | 507 | 458742 | 459248 | Aggregatibacter aphrophilus strain NCTC11096 genome assembly, chromosome: 1 | blastn | 291133 | 754 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Aggregatibacter | Aggregatibacter aphrophilus | ||
| 3753671 | 3753671 | PRJNA753151_S_NODE_98603_length_284_cov_4.211618_g96313_i0 | PRJNA753151 | 98603 | 284 | 4.211618 | 11.96099512 | root | 1 | Root_unresolved | Root_unresolved | 520 | 5.98e-143 | NTclustered | gi|1085842361|emb|LT629753.1| | 651740 | g96313 | i0 | 99.648 | 100 | 284 | 1 | 100 | 0 | 1 | 284 | 3558087 | 3557804 | Pseudomonas cedrina strain BS2981 genome assembly, chromosome: I | blastn | 28400 | 525 | 0.990476190476191 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas cedrina | ||
| 5030217 | 5030217 | PRJNA753151_S_NODE_318184_length_154_cov_1.324324_g315894_i0 | PRJNA753151 | 318184 | 154 | 1.324324 | 2.03945896 | Massilia | 149698 | Bacteria | Bacteria | 263 | 5.36e-66 | NTclustered | gi|1917238871|gb|CP062941.1| | 2769491 | g315894 | i0 | 97.403 | 488.681818181818 | 154 | 4 | 100 | 0 | 1 | 154 | 1007227 | 1007074 | Massilia litorea strain LPB0304 chromosome, complete genome | blastn | 75257 | 263 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia litorea | ||
| 7579918 | 7579918 | PRJNA753151_S_NODE_57686_length_345_cov_8.625828_g55396_i0 | PRJNA753151 | 57686 | 345 | 8.625828 | 29.7591066 | Pseudoxanthomonas | 83618 | Bacteria | Bacteria | 632 | 9.17e-177 | NTclustered | gi|2837406283|gb|CP171632.1| | 69284 | g55396 | i0 | 99.71 | 188.005797101449 | 345 | 1 | 100 | 0 | 1 | 345 | 432449 | 432793 | Pseudoxanthomonas japonensis strain LY0623 chromosome, complete genome | blastn | 64862 | 632 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas japonensis | ||
| 8854848 | 8854848 | PRJNA753151_S_NODE_156667_length_232_cov_2.470899_g154377_i0 | PRJNA753151 | 156667 | 232 | 2.470899 | 5.73248568 | root | 1 | Root_unresolved | Root_unresolved | 385 | 1.7999999999999996e-102 | NTclustered | gi|2235235875|gb|CP096810.1| | 573 | g154377 | i0 | 99.07 | 86.9008620689655 | 215 | 1 | 93 | 1 | 1 | 215 | 5443687 | 5443474 | Klebsiella pneumoniae strain Bio19 chromosome, complete genome | blastn | 20161 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 8854874 | 8854874 | PRJNA753151_S_NODE_210547_length_198_cov_4.141935_g208257_i0 | PRJNA753151 | 210547 | 198 | 4.141935 | 8.2010313 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 366 | 5.4e-97 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g208257 | i0 | 100 | 100 | 198 | 0 | 100 | 0 | 1 | 198 | 3860500 | 3860697 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19800 | 366 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8854878 | 8854878 | PRJNA753151_S_NODE_217227_length_195_cov_1.769737_g214937_i0 | PRJNA753151 | 217227 | 195 | 1.769737 | 3.45098715 | Pseudomonas | 286 | Bacteria | Bacteria | 361 | 2.46e-95 | NTclustered | gi|1774395784|gb|CP045767.1| | 2664899 | g214937 | i0 | 100 | 99.9846153846154 | 195 | 0 | 100 | 0 | 1 | 195 | 4396698 | 4396504 | Pseudomonas sp. CFSAN084952 chromosome, complete genome | blastn | 19497 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. CFSAN084952 | ||
| 9657824 | 9657824 | PRJNA753151_S_NODE_103328_length_279_cov_2.343220_g101038_i0 | PRJNA753151 | 103328 | 279 | 2.34322 | 6.5375838 | Burkholderia mallei | 13373 | Bacteria | Bacteria | 483 | 7.689999999999998e-132 | NTclustered | gi|685669727|gb|CP008711.1| | 13373 | g101038 | i0 | 98.535 | 197.867383512545 | 273 | 4 | 98 | 0 | 7 | 279 | 2609183 | 2609455 | Burkholderia mallei strain 6 chromosome 1, complete sequence | blastn | 55205 | 483 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia mallei | ||
| 10130549 | 10130549 | PRJNA753151_S_NODE_220028_length_193_cov_4.006667_g217738_i0 | PRJNA753151 | 220028 | 193 | 4.006667 | 7.73286731 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 357 | 3.1499999999999996e-94 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g217738 | i0 | 100 | 100 | 193 | 0 | 100 | 0 | 1 | 193 | 3485663 | 3485471 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 19300 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10130628 | 10130628 | PRJNA753151_S_NODE_9888_length_656_cov_4.192496_g8325_i0 | PRJNA753151 | 9888 | 656 | 4.192496 | 27.50277376 | Pseudomonas | 286 | Bacteria | Bacteria | 896 | 0 | NTclustered | gi|2309546450|gb|CP104861.1| | 296 | g8325 | i0 | 92.675 | 564.082317073171 | 628 | 37 | 95 | 7 | 1 | 625 | 500136 | 499515 | Pseudomonas fragi strain D12 chromosome, complete genome | blastn | 370038 | 902 | 0.993348115299335 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fragi | ||
| 10934619 | 10934619 | PRJNA753151_S_NODE_325649_length_151_cov_3.333333_g323359_i0 | PRJNA753151 | 325649 | 151 | 3.333333 | 5.03333283 | Halopseudomonas phragmitis | 1931241 | Bacteria | Bacteria | 279 | 5.19e-71 | NTclustered | gi|1162906871|gb|CP020100.1| | 1931241 | g323359 | i0 | 100 | 11.4635761589404 | 151 | 0 | 100 | 0 | 1 | 151 | 3289108 | 3288958 | Halopseudomonas phragmitis strain S-6-2 chromosome, complete genome | blastn | 1731 | 279 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Halopseudomonas | Halopseudomonas phragmitis | ||
| 11405668 | 11405668 | PRJNA753151_S_NODE_145969_length_240_cov_2.796954_g143679_i0 | PRJNA753151 | 145969 | 240 | 2.796954 | 6.7126896 | root | 1 | Root_unresolved | Root_unresolved | 444 | 3.05e-120 | NTclustered | gi|1775479228|gb|MN691331.1| | 292 | g143679 | i0 | 100 | 102 | 240 | 0 | 100 | 0 | 1 | 240 | 556 | 317 | Burkholderia cepacia strain CK1_1_1 16S ribosomal RNA gene, partial sequence | blastn | 24480 | 444 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia cepacia | ||
| 11405714 | 11405714 | PRJNA753151_S_NODE_263489_length_173_cov_3.753846_g261199_i0 | PRJNA753151 | 263489 | 173 | 3.753846 | 6.49415358 | Rickettsiales | 766 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|2196998535|gb|CP092138.1| | 955 | g261199 | i0 | 100 | 102 | 173 | 0 | 100 | 0 | 1 | 173 | 183852 | 184024 | Wolbachia pipientis isolate F7_C chromosome | blastn | 17646 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Wolbachia | Wolbachia pipientis | ||
| 12681573 | 12681573 | PRJNA753151_S_NODE_285930_length_165_cov_1.475410_g283640_i0 | PRJNA753151 | 285930 | 165 | 1.47541 | 2.4344265 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g283640 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 3898417 | 3898581 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12681616 | 12681616 | PRJNA753151_S_NODE_9990_length_653_cov_7.834426_g8415_i0 | PRJNA753151 | 9990 | 653 | 7.834426 | 51.15880178 | Pseudomonas | 286 | Bacteria | Bacteria | 1077 | 0 | NTclustered | gi|2853949622|gb|CP173616.1| | 298 | g8415 | i0 | 97.913 | 519.018376722818 | 623 | 11 | 95 | 2 | 32 | 653 | 1980536 | 1979915 | Pseudomonas marginalis strain M13 chromosome, complete genome | blastn | 338919 | 1083 | 0.994459833795014 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas marginalis | ||
| 15230461 | 15230461 | PRJNA753151_S_NODE_271852_length_170_cov_2.125984_g269562_i0 | PRJNA753151 | 271852 | 170 | 2.125984 | 3.6141728 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g269562 | i0 | 100 | 100 | 170 | 0 | 100 | 0 | 1 | 170 | 1663037 | 1663206 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 17000 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16032034 | 16032034 | PRJNA753151_S_NODE_115253_length_267_cov_1.205357_g112963_i0 | PRJNA753151 | 115253 | 267 | 1.205357 | 3.21830319 | Atlantibacter subterraneus | 255519 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|2270295603|gb|CP100494.1| | 255519 | g112963 | i0 | 100 | 0.104868913857678 | 28 | 0 | 10 | 0 | 219 | 246 | 3263953 | 3263926 | Atlantibacter subterranea strain LH84-a chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Atlantibacter | Atlantibacter subterraneus | ||
| 16032697 | 16032697 | PRJNA753151_S_NODE_235853_length_185_cov_5.795775_g233563_i0 | PRJNA753151 | 235853 | 185 | 5.795775 | 10.72218375 | Burkholderia contaminans | 488447 | Bacteria | Bacteria | 342 | 8.369999999999999e-90 | NTclustered | gi|2090906657|gb|CP082809.1| | 488447 | g233563 | i0 | 100 | 25.0108108108108 | 185 | 0 | 100 | 0 | 1 | 185 | 1200304 | 1200488 | Burkholderia contaminans strain SCAID TST1-2021 (11/270) chromosome 3, complete sequence | blastn | 4627 | 342 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia contaminans | ||
| 16504757 | 16504757 | PRJNA753151_S_NODE_113113_length_269_cov_1.539823_g110823_i0 | PRJNA753151 | 113113 | 269 | 1.539823 | 4.14212387 | Escherichia | 561 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g110823 | i0 | 100 | 100 | 269 | 0 | 100 | 0 | 1 | 269 | 4024484 | 4024752 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 26900 | 497 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17779620 | 17779620 | PRJNA753151_S_NODE_257154_length_176_cov_2.030075_g254864_i0 | PRJNA753151 | 257154 | 176 | 2.030075 | 3.572932 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g254864 | i0 | 100 | 100 | 176 | 0 | 100 | 0 | 1 | 176 | 2758154 | 2758329 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 17600 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19053699 | 19053699 | PRJNA753151_S_NODE_80135_length_308_cov_2.403774_g77845_i0 | PRJNA753151 | 80135 | 308 | 2.403774 | 7.40362392 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 569 | 6.419999999999998e-158 | NTclustered | gi|2483364719|emb|OX460336.1| | 562 | g77845 | i0 | 100 | 366 | 308 | 0 | 100 | 0 | 1 | 308 | 1175662 | 1175969 | Escherichia coli strain EC0026B genome assembly, chromosome: 1 | blastn | 112728 | 569 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19053706 | 19053706 | PRJNA753151_S_NODE_97535_length_285_cov_8.351240_g95245_i0 | PRJNA753151 | 97535 | 285 | 8.35124 | 23.801034 | Moraxellaceae | 468 | Bacteria | Bacteria | 527 | 3.59e-145 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g95245 | i0 | 100 | 359.824561403509 | 285 | 0 | 100 | 0 | 1 | 285 | 1497480 | 1497764 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 102550 | 527 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 20328337 | 20328337 | PRJNA753151_S_NODE_211936_length_198_cov_1.161290_g209646_i0 | PRJNA753151 | 211936 | 198 | 1.16129 | 2.2993542 | Escherichia | 561 | Bacteria | Bacteria | 366 | 5.4e-97 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g209646 | i0 | 100 | 100 | 198 | 0 | 100 | 0 | 1 | 198 | 2571275 | 2571472 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 19800 | 366 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20328347 | 20328347 | PRJNA753151_S_NODE_238316_length_184_cov_3.191489_g236026_i0 | PRJNA753151 | 238316 | 184 | 3.191489 | 5.87233976 | Pseudomonas | 286 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|1774395784|gb|CP045767.1| | 2664899 | g236026 | i0 | 100 | 99.9347826086957 | 184 | 0 | 100 | 0 | 1 | 184 | 593558 | 593375 | Pseudomonas sp. CFSAN084952 chromosome, complete genome | blastn | 18388 | 340 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. CFSAN084952 | ||
| 20328349 | 20328349 | PRJNA753151_S_NODE_241196_length_183_cov_1.928571_g238906_i0 | PRJNA753151 | 241196 | 183 | 1.928571 | 3.52928493 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g238906 | i0 | 100 | 100 | 183 | 0 | 100 | 0 | 1 | 183 | 2102739 | 2102921 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 18300 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21604062 | 21604062 | PRJNA753151_S_NODE_243517_length_182_cov_1.870504_g241227_i0 | PRJNA753151 | 243517 | 182 | 1.870504 | 3.40431728 | root | 1 | Root_unresolved | Root_unresolved | 209 | 8.68e-50 | NTclustered | gi|2676253419|gb|CP144736.1| | 322710 | g241227 | i0 | 87.363 | 99.7857142857143 | 182 | 23 | 100 | 0 | 1 | 182 | 3213337 | 3213518 | Azotobacter vinelandii DJ chromosome, complete genome | blastn | 18161 | 209 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Azotobacter | Azotobacter vinelandii | ||
| 21604097 | 21604097 | PRJNA753151_S_NODE_303257_length_159_cov_1.163793_g300967_i0 | PRJNA753151 | 303257 | 159 | 1.163793 | 1.85043087 | Pseudomonas | 286 | Bacteria | Bacteria | 294 | 1.98e-75 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g300967 | i0 | 100 | 100 | 159 | 0 | 100 | 0 | 1 | 159 | 1225292 | 1225450 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 15900 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 22407282 | 22407282 | PRJNA753151_S_NODE_206298_length_201_cov_1.151899_g204008_i0 | PRJNA753151 | 206298 | 201 | 1.151899 | 2.31531699 | Actinobacillus equuli | 718 | Bacteria | Bacteria | 322 | 1.21e-83 | NTclustered | gi|2489166455|gb|CP103829.1| | 202948 | g204008 | i0 | 95.522 | 563.174129353234 | 201 | 9 | 100 | 0 | 1 | 201 | 265944 | 265744 | Actinobacillus equuli subsp. haemolyticus strain 2863 chromosome, complete genome | blastn | 113198 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Actinobacillus | Actinobacillus equuli | ||
| 22879484 | 22879484 | PRJNA753151_S_NODE_26078_length_456_cov_6.629540_g23906_i0 | PRJNA753151 | 26078 | 456 | 6.62954 | 30.2307024 | Pseudoxanthomonas | 83618 | Bacteria | Bacteria | 789 | 0 | NTclustered | gi|2837406283|gb|CP171632.1| | 69284 | g23906 | i0 | 99.538 | 169.699561403509 | 433 | 2 | 95 | 0 | 24 | 456 | 431051 | 431483 | Pseudoxanthomonas japonensis strain LY0623 chromosome, complete genome | blastn | 77383 | 789 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas japonensis | ||
| 23683073 | 23683073 | PRJNA753151_S_NODE_246899_length_180_cov_5.255474_g244609_i0 | PRJNA753151 | 246899 | 180 | 5.255474 | 9.4598532 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2257563109|gb|CP090416.1| | 40214 | g244609 | i0 | 100 | 0.161111111111111 | 29 | 0 | 16 | 0 | 60 | 88 | 2993035 | 2993063 | Acinetobacter johnsonii strain ICE_NC chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 24153486 | 24153486 | PRJNA753151_S_NODE_127619_length_255_cov_3.254717_g125329_i0 | PRJNA753151 | 127619 | 255 | 3.254717 | 8.29952835 | root | 1 | Root_unresolved | Root_unresolved | 472 | 1.5e-128 | NTclustered | gi|674993598|dbj|AP014630.1| | 106649 | g125329 | i0 | 100 | 599.207843137255 | 255 | 0 | 100 | 0 | 1 | 255 | 23198 | 22944 | Acinetobacter guillouiae DNA, complete geonome, strain: NBRC 110550 | blastn | 152798 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter guillouiae | ||
| 24153574 | 24153574 | PRJNA753151_S_NODE_307439_length_157_cov_2.368421_g305149_i0 | PRJNA753151 | 307439 | 157 | 2.368421 | 3.71842097 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 291 | 2.52e-74 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g305149 | i0 | 100 | 100 | 157 | 0 | 100 | 0 | 1 | 157 | 915571 | 915727 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 15700 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 24956161 | 24956161 | PRJNA753151_S_NODE_162180_length_228_cov_2.459459_g159890_i0 | PRJNA753151 | 162180 | 228 | 2.459459 | 5.60756652 | Pseudomonas sp. B10 | 118613 | Bacteria | Bacteria | 361 | 2.97e-95 | NTclustered | gi|1131753135|emb|LT707063.1| | 118613 | g159890 | i0 | 95.175 | 86.0175438596491 | 228 | 11 | 100 | 0 | 1 | 228 | 5716955 | 5717182 | Pseudomonas sp. B10 genome assembly, chromosome: I | blastn | 19612 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. B10 | ||
| 25428471 | 25428471 | PRJNA753151_S_NODE_130060_length_253_cov_2.642857_g127770_i0 | PRJNA753151 | 130060 | 253 | 2.642857 | 6.68642821 | Bacteria | 2 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1373029274|gb|CP028150.1| | 488 | g127770 | i0 | 100 | 342.00395256917 | 253 | 0 | 100 | 0 | 1 | 253 | 76003 | 76255 | Neisseria mucosa strain ATCC 19696 chromosome, complete genome | blastn | 86527 | 468 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria mucosa | ||
| 25428473 | 25428473 | PRJNA753151_S_NODE_131200_length_252_cov_2.765550_g128910_i0 | PRJNA753151 | 131200 | 252 | 2.76555 | 6.969186 | Escherichia | 561 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2161252967|gb|CP088071.1| | 562 | g128910 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 2894622 | 2894873 | Escherichia coli strain 427603 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25428485 | 25428485 | PRJNA753151_S_NODE_168960_length_223_cov_6.155556_g166670_i0 | PRJNA753151 | 168960 | 223 | 6.155556 | 13.72688988 | root | 1 | Root_unresolved | Root_unresolved | 412 | 7.88e-111 | NTclustered | gi|511543307|gb|KC866267.1| | 747 | g166670 | i0 | 100 | 105 | 223 | 0 | 100 | 0 | 1 | 223 | 331 | 109 | Pasteurella multocida strain Melo44TG 16S ribosomal RNA gene, partial sequence | blastn | 23415 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Pasteurella | Pasteurella multocida | ||
| 25428544 | 25428544 | PRJNA753151_S_NODE_286420_length_165_cov_1.106557_g284130_i0 | PRJNA753151 | 286420 | 165 | 1.106557 | 1.82581905 | Acetobacterales | 3120395 | Bacteria | Bacteria | 191 | 2.7999999999999995e-44 | NTclustered | gi|2156612837|gb|CP087719.1| | 2897332 | g284130 | i0 | 88.024 | 183.030303030303 | 167 | 12 | 99 | 8 | 1 | 163 | 1258805 | 1258967 | Roseomonas cutis strain OT10 chromosome, complete genome | blastn | 30200 | 191 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas cutis | ||
| 25428579 | 25428579 | PRJNA753151_S_NODE_61380_length_338_cov_4.545763_g59090_i0 | PRJNA753151 | 61380 | 338 | 4.545763 | 15.36467894 | root | 1 | Root_unresolved | Root_unresolved | 512 | 1.22e-140 | NTclustered | gi|2522625247|gb|CP128203.1| | 29494 | g59090 | i0 | 98.616 | 91.2603550295858 | 289 | 4 | 86 | 0 | 1 | 289 | 458 | 746 | Vibrio furnissii strain VFBJ07 plasmid pVFBJ07-2, complete sequence | blastn | 30846 | 512 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio furnissii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;