contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA753151" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 729547 | 729547 | PRJNA753151_S_NODE_154821_length_233_cov_5.678947_g152531_i0 | PRJNA753151 | 154821 | 233 | 5.678947 | 13.23194651 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 409 | 1.07e-109 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g152531 | i0 | 98.696 | 359.467811158798 | 230 | 3 | 99 | 0 | 1 | 230 | 553137 | 552908 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 83756 | 409 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 730011 | 730011 | PRJNA753151_S_NODE_238701_length_184_cov_2.290780_g236411_i0 | PRJNA753151 | 238701 | 184 | 2.29078 | 4.2150352 | Streptomyces pactum | 68249 | Bacteria | Bacteria | 121 | 4.24e-23 | NTclustered | gi|1148979828|gb|CP019724.1| | 68249 | g236411 | i0 | 86.916 | 58.1141304347826 | 107 | 14 | 58 | 0 | 4 | 110 | 8060363 | 8060257 | Streptomyces pactum strain ACT12, complete genome | blastn | 10693 | 121 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces pactum | ||
| 5030170 | 5030170 | PRJNA753151_S_NODE_220524_length_193_cov_2.400000_g218234_i0 | PRJNA753151 | 220524 | 193 | 2.4 | 4.632 | Rothia | 32207 | Bacteria | Bacteria | 357 | 3.1499999999999996e-94 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g218234 | i0 | 100 | 102.139896373057 | 193 | 0 | 100 | 0 | 1 | 193 | 653802 | 653610 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 19713 | 357 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 9658271 | 9658271 | PRJNA753151_S_NODE_186888_length_212_cov_2.000000_g184598_i0 | PRJNA753151 | 186888 | 212 | 2 | 4.24 | Mycobacterium gallinarum | 39689 | Bacteria | Bacteria | 163 | 8.25e-36 | NTclustered | gi|1806400554|dbj|AP022601.1| | 39689 | g184598 | i0 | 87.324 | 1.87735849056604 | 142 | 18 | 67 | 0 | 4 | 145 | 1985189 | 1985048 | Mycobacterium gallinarum JCM 6399 DNA, nearly complete genome | blastn | 398 | 163 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium gallinarum | ||
| 11405669 | 11405669 | PRJNA753151_S_NODE_147709_length_239_cov_1.418367_g145419_i0 | PRJNA753151 | 147709 | 239 | 1.418367 | 3.38989713 | Actinomycetes | 1760 | Bacteria | Bacteria | 442 | 1.0899999999999994e-119 | NTclustered | gi|2871328653|gb|PQ778076.1| | 1720 | g145419 | i0 | 100 | 103.008368200837 | 239 | 0 | 100 | 0 | 1 | 239 | 344 | 106 | Corynebacterium sp. strain LaCa142 16S ribosomal RNA gene, partial sequence | blastn | 24619 | 442 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. | ||
| 12208887 | 12208887 | PRJNA753151_S_NODE_12590_length_600_cov_9.570916_g10807_i0 | PRJNA753151 | 12590 | 600 | 9.570916 | 57.425496 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 774 | 0 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g10807 | i0 | 92.238 | 246.345 | 554 | 32 | 92 | 9 | 1 | 551 | 553128 | 553673 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 147807 | 774 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 12209487 | 12209487 | PRJNA753151_S_NODE_232710_length_187_cov_1.875000_g230420_i0 | PRJNA753151 | 232710 | 187 | 1.875 | 3.50625 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 346 | 6.56e-91 | NTclustered | gi|1585470349|emb|LR031349.1| | 1528099 | g230420 | i0 | 100 | 271.320855614973 | 187 | 0 | 100 | 0 | 1 | 187 | 297 | 483 | Lawsonella clevelandensis DNA containing 16S-23S intergenic spacer region, isolate ALS9 SC1 | blastn | 50737 | 346 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 13955824 | 13955824 | PRJNA753151_S_NODE_1551_length_1388_cov_9.211896_g1289_i0 | PRJNA753151 | 1551 | 1388 | 9.211896 | 127.86111648 | Corynebacterium | 1716 | Bacteria | Bacteria | 2217 | 0 | NTclustered | gi|2550468567|gb|CP100375.1| | 38284 | g1289 | i0 | 96.318 | 364.968299711816 | 1358 | 35 | 97 | 14 | 16 | 1363 | 2491838 | 2493190 | Corynebacterium accolens strain CA8 chromosome | blastn | 506576 | 2217 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 16032126 | 16032126 | PRJNA753151_S_NODE_136113_length_248_cov_2.263415_g133823_i0 | PRJNA753151 | 136113 | 248 | 2.263415 | 5.6132692 | uncultured Solirubrobacterales bacterium | 768556 | Bacteria | Bacteria | 261 | 3.42e-65 | NTclustered | gi|2874253818|emb|OY969802.1| | 768556 | g133823 | i0 | 85.657 | 83.1935483870968 | 251 | 32 | 100 | 4 | 1 | 248 | 849109 | 849358 | MAG: uncultured Solirubrobacterales bacterium isolate MFD02840.bin.1.179 genome assembly, chromosome: 1 | blastn | 20632 | 261 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | uncultured Solirubrobacterales bacterium | ||||
| 16504809 | 16504809 | PRJNA753151_S_NODE_207733_length_200_cov_1.719745_g205443_i0 | PRJNA753151 | 207733 | 200 | 1.719745 | 3.43949 | Corynebacterium | 1716 | Bacteria | Bacteria | 344 | 2.56e-90 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g205443 | i0 | 100 | 294.985 | 186 | 0 | 93 | 0 | 1 | 186 | 2491280 | 2491465 | Corynebacterium accolens strain CA3 chromosome | blastn | 58997 | 344 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 17308019 | 17308019 | PRJNA753151_S_NODE_214994_length_196_cov_2.058824_g212704_i0 | PRJNA753151 | 214994 | 196 | 2.058824 | 4.03529504 | Corynebacterium coyleae | 53374 | Bacteria | Bacteria | 357 | 3.2099999999999996e-94 | NTclustered | gi|2058472593|gb|CP077302.1| | 53374 | g212704 | i0 | 99.492 | 384.076530612245 | 197 | 0 | 100 | 1 | 1 | 196 | 501514 | 501710 | Corynebacterium coyleae strain FDAARGOS 1425 chromosome, complete genome | blastn | 75279 | 357 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium coyleae | ||
| 20328357 | 20328357 | PRJNA753151_S_NODE_250856_length_179_cov_1.323529_g248566_i0 | PRJNA753151 | 250856 | 179 | 1.323529 | 2.36911691 | Cutibacterium | 1912216 | Bacteria | Bacteria | 331 | 1.74e-86 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g248566 | i0 | 100 | 50.7653631284916 | 179 | 0 | 100 | 0 | 1 | 179 | 668002 | 667824 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 9087 | 331 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23682433 | 23682433 | PRJNA753151_S_NODE_124679_length_258_cov_1.674419_g122389_i0 | PRJNA753151 | 124679 | 258 | 1.674419 | 4.32000102 | uncultured Actinomycetota bacterium | 3039803 | Bacteria | Bacteria | 449 | 7.13e-122 | NTclustered | gi|2874253708|emb|OY969473.1| | 3039803 | g122389 | i0 | 98.062 | 527.693798449612 | 258 | 5 | 100 | 0 | 1 | 258 | 1215036 | 1215293 | MAG: uncultured Actinomycetota bacterium isolate MFD01275.bin.c.21 genome assembly, chromosome: 1 | blastn | 136145 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | uncultured Actinomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;