RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA753151" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA753151 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2006530 2006530 PRJNA753151_S_NODE_311322_length_156_cov_1.672566_g309032_i0 PRJNA753151 311322 156 1.672566 2.60920296 Deinococcus taeanensis 2737050 Bacteria Bacteria 231 1.5399999999999998e-56   NTclustered gi|2105694697|gb|CP083456.1| 2737050 g309032 i0 93.59 170.75 156 9 100 1 1 156 1429 1275 Deinococcus taeanensis strain TS293 plasmid p_TS293_2, complete sequence blastn 26637 231 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taeanensis
13484548 13484548 PRJNA753151_S_NODE_63771_length_334_cov_2.010309_g61481_i0 PRJNA753151 63771 334 2.010309 6.71443206 Deinococcus actinosclerus 1768108 Bacteria Bacteria 544 4.26e-150   NTclustered gi|972944657|gb|CP013910.1| 1768108 g61481 i0 96.108 196.167664670659 334 12 100 1 1 334 74117 73785 Deinococcus actinosclerus strain BM2 chromosome, complete genome blastn 65520 544 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus actinosclerus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;