RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA753151" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA753151 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2477365 2477365 PRJNA753151_S_NODE_97282_length_286_cov_1.666667_g94992_i0 PRJNA753151 97282 286 1.666667 4.76666762 Mucilaginibacter 423349 Bacteria Bacteria 496 1.02e-135   NTclustered gi|1085785005|emb|LT629740.1| 652787 g94992 i0 97.909 370.325174825175 287 4 100 2 1 286 4557803 4558088 Mucilaginibacter mallensis strain MP1X4 genome assembly, chromosome: I blastn 105913 496 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter mallensis
4557880 4557880 PRJNA753151_S_NODE_130244_length_253_cov_2.133333_g127954_i0 PRJNA753151 130244 253 2.133333 5.39733249 Mucilaginibacter sp. 14171R-50 2703789 Bacteria Bacteria 351 2.02e-92   NTclustered gi|1804505538|gb|CP048115.1| 2703789 g127954 i0 92.946 354.288537549407 241 17 95 0 13 253 720517 720757 Mucilaginibacter sp. 14171R-50 chromosome, complete genome blastn 89635 351 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter sp. 14171R-50
13955891 13955891 PRJNA753151_S_NODE_266291_length_172_cov_2.705426_g264001_i0 PRJNA753151 266291 172 2.705426 4.65333272 Flavobacterium 237 Bacteria Bacteria 63.9 6.66e-6   NTclustered gi|2243410383|gb|CP097434.1| 907046 g264001 i0 93.023 5.68023255813953 43 3 25 0 35 77 24576 24618 Flavobacterium sp. B183 chromosome blastn 977 63.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. B183
15230393 15230393 PRJNA753151_S_NODE_161892_length_228_cov_3.470270_g159602_i0 PRJNA753151 161892 228 3.47027 7.9122156 Flavobacterium 237 Bacteria Bacteria 422 1.34e-113   NTclustered gi|1993663771|gb|CP068294.1| 2724135 g159602 i0 100 536.118421052632 228 0 100 0 1 228 807376 807603 Flavobacterium sp. CLA17 chromosome blastn 122235 422 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. CLA17
17308561 17308561 PRJNA753151_S_NODE_299614_length_160_cov_1.538462_g297324_i0 PRJNA753151 299614 160 1.538462 2.4615392 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 143 7.649999999999998e-30   NTclustered gi|2874253728|emb|OY969570.1| 412054 g297324 i0 82.927 129.8625 164 22 100 5 1 160 171767 171606 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 20778 143 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
21133270 21133270 PRJNA753151_S_NODE_55737_length_349_cov_10.921569_g53447_i0 PRJNA753151 55737 349 10.921569 38.11627581 uncultured Draconibacterium sp. 1573823 Bacteria Bacteria 52.8 0.033   NTclustered gi|2621784655|emb|OY781113.1| 1573823 g53447 i0 100 0.0802292263610315 28 0 8 0 310 337 425133 425106 MAG: uncultured Draconibacterium sp. isolate abe71d63-47d4-46f6-900f-15657cc07270 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae Draconibacterium uncultured Draconibacterium sp.
22879462 22879462 PRJNA753151_S_NODE_210658_length_198_cov_3.483871_g208368_i0 PRJNA753151 210658 198 3.483871 6.89806458 Phocaeicola 909656 Bacteria Bacteria 366 5.4e-97   NTclustered gi|2290438071|gb|CP103067.1| 821 g208368 i0 100 343.651515151515 198 0 100 0 1 198 320284 320481 Phocaeicola vulgatus strain BFG-626 chromosome, complete genome blastn 68043 366 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;