RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA752572" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752572 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12208102 12208102 PRJNA752572_P_NODE_61730_length_347_cov_3.173077_g61223_i0 PRJNA752572 61730 347 3.173077 11.01057719 Adineta vaga 104782 Rotifera other_Eukaryota 608 1.5499999999999992e-169   NTclustered gi|259129963|gb|GQ398061.1| 104782 g61223 i0 98.271 4.4178674351585 347 6 100 0 1 347 10047 10393 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1533 608 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16504333 16504333 PRJNA752572_P_NODE_29473_length_502_cov_3.451820_g28991_i0 PRJNA752572 29473 502 3.45182 17.328136400000002 Adineta 104781 Rotifera other_Eukaryota 878 0   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g28991 i0 98.397 60.0717131474104 499 8 99 0 4 502 2143 1645 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 30156 878 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
19053097 19053097 PRJNA752572_P_NODE_128535_length_236_cov_4.024876_g128028_i0 PRJNA752572 128535 236 4.024876 9.49870736 Adinetidae 104780 Rotifera other_Eukaryota 436 4.999999999999999e-118   NTclustered gi|2537903788|gb|KM043253.2| 104782 g128028 i0 100 99.9491525423729 236 0 100 0 1 236 536 771 Adineta vaga voucher AD006 18S ribosomal RNA gene, partial sequence blastn 23588 436 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
19053127 19053127 PRJNA752572_P_NODE_91315_length_283_cov_2.681452_g90808_i0 PRJNA752572 91315 283 2.681452 7.58850916 Adineta 104781 Rotifera other_Eukaryota 512 9.97e-141   NTclustered gi|72153731|gb|DQ089739.1| 104782 g90808 i0 99.293 93.4452296819788 283 2 100 0 1 283 787 505 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 26445 512 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;