RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA752572" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752572 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2004637 2004637 PRJNA752572_P_NODE_229742_length_174_cov_3.453237_g229235_i0 PRJNA752572 229742 174 3.453237 6.00863238 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g229235 i0 100 0.666666666666667 29 0 17 0 102 130 8938018 8937990 Anemonia sulcata genome assembly, chromosome: 14 blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
5029651 5029651 PRJNA752572_P_NODE_105484_length_263_cov_1.153509_g104977_i0 PRJNA752572 105484 263 1.153509 3.03372867 root 1 Root_unresolved Root_unresolved 52.8 0.024   NTclustered gi|2917940756|emb|OZ237571.1| 6108 g104977 i0 100 6.04182509505703 28 0 11 0 236 263 4612409 4612382 Anemonia sulcata genome assembly, chromosome: 17 blastn 1589 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
10932575 10932575 PRJNA752572_P_NODE_141689_length_225_cov_1.610526_g141182_i0 PRJNA752572 141689 225 1.610526 3.6236835 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 99 2.53e-16   NTclustered gi|2782847785|ref|XM_067056529.1| 252671 g141182 i0 83.81 9.58222222222222 105 15 46 2 3 106 621 724 PREDICTED: Clytia hemisphaerica histone H2A-like (LOC136799824), mRNA blastn 2156 99 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
14757563 14757563 PRJNA752572_P_NODE_97492_length_274_cov_1.338912_g96985_i0 PRJNA752572 97492 274 1.338912 3.66861888 Clytia sp. 3 AFC-2016 1886627 Cnidaria other_Eukaryota 80.5 1.15e-10   NTclustered gi|1069323992|gb|KX665509.1| 1886627 g96985 i0 78.169 17.0401459854015 142 20 49 10 137 270 1735 1597 Clytia sp. 3 AFC-2016 voucher MZUSP:2801 28S ribosomal RNA gene, partial sequence blastn 4669 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia sp. 3 AFC-2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;