RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA752572" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA752572 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
728561 728561 PRJNA752572_P_NODE_162521_length_210_cov_0.971429_g162014_i0 PRJNA752572 162521 210 0.971429 2.0400009 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|915003962|ref|XM_013393818.1| 5801 g162014 i0 100 0.276190476190476 30 0 14 0 40 69 233 204 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 58 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
10932620 10932620 PRJNA752572_P_NODE_258169_length_166_cov_2.671756_g257662_i0 PRJNA752572 258169 166 2.671756 4.43511496 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|820696962|tpe|LN714494.1| 432359 g257662 i0 97.059 2.02409638554217 34 0 20 1 60 92 695087 695054 TPA_asm: Toxoplasma gondii VEG, chromosome chrV, complete genome blastn 336 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
19855651 19855651 PRJNA752572_P_NODE_142056_length_225_cov_1.084211_g141549_i0 PRJNA752572 142056 225 1.084211 2.43947475 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 300 6.47e-77   NTclustered gi|921123462|ref|XM_013580892.1| 51315 g141549 i0 92.857 77.9866666666667 210 9 100 6 1 207 570 364 Eimeria necatrix hypothetical protein partial mRNA blastn 17547 300 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
19855693 19855693 PRJNA752572_P_NODE_236436_length_172_cov_2.284672_g235929_i0 PRJNA752572 236436 172 2.284672 3.92963584 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 117 5.04e-22   NTclustered gi|915128918|ref|XM_013479492.1| 5804 g235929 i0 85.217 4.33720930232558 115 15 66 2 57 170 793 906 Eimeria maxima hypothetical protein partial mRNA blastn 746 117 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
24955105 24955105 PRJNA752572_P_NODE_113900_length_252_cov_2.354839_g113393_i0 PRJNA752572 113900 252 2.354839 5.93419428 Porospora cf. gigantea A 2853593 SAR_Eukaryotes SAR_Eukaryotes 67.6 8.16e-7   NTclustered gi|2794693389|ref|XM_067953077.1| 2853593 g113393 i0 93.333 0.178571428571429 45 3 18 0 114 158 147 103 MAG: Porospora cf. gigantea A uncharacterized protein (KVP18_002296), partial mRNA blastn 45 67.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea A

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;