RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA752572" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752572 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19855679 19855679 PRJNA752572_P_NODE_204536_length_186_cov_1.311258_g204029_i0 PRJNA752572 204536 186 1.311258 2.43893988 Ailoscolex lacteospumosus 1046305 Annelida Annelida 75 3.39e-9   NTclustered gi|2920003527|emb|OZ238867.1| 1046305 g204029 i0 90.909 5.67741935483871 55 5 30 0 22 76 20169911 20169965 Ailoscolex lacteospumosus genome assembly, chromosome: 8 blastn 1056 75 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
21131169 21131169 PRJNA752572_P_NODE_210557_length_183_cov_1.540541_g210050_i0 PRJNA752572 210557 183 1.540541 2.81919003 Ailoscolex lacteospumosus 1046305 Annelida Annelida 60.2 9.31e-5   NTclustered gi|2920003257|emb|OZ238860.1| 1046305 g210050 i0 100 0.497267759562842 32 0 17 0 13 44 9432711 9432742 Ailoscolex lacteospumosus genome assembly, chromosome: 1 blastn 91 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
23681606 23681606 PRJNA752572_P_NODE_61959_length_346_cov_11.594855_g61452_i0 PRJNA752572 61959 346 11.594855 40.1181983 Platynereis dumerilii 6359 Annelida Annelida 87.9 8.98e-13   NTclustered gi|224586645|emb|FN185992.1| 6359 g61452 i0 93.333 3.35260115606936 60 3 17 1 7 66 2147 2089 Platynereis dumerilii partial mRNA for putative zinc finger transcription factor (snail2 gene) blastn 1160 87.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;