RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5830685 5830685 PRJNA752278_P_NODE_20665_length_351_cov_1.676259_g20462_i0 PRJNA752278 20665 351 1.676259 5.88366909 Linderina pennispora 61395 Fungi Fungi 335 2.9399999999999985e-87   NTclustered gi|2028315762|ref|XM_040886762.1| 61395 g20462 i0 85.196 95.6096866096866 331 43 94 2 21 351 958 634 Linderina pennispora ubiquitin-domain-containing protein (DL89DRAFT_265656), partial mRNA blastn 33559 335 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
7578738 7578738 PRJNA752278_P_NODE_27826_length_314_cov_3.385892_g27623_i0 PRJNA752278 27826 314 3.385892 10.63170088 Fungi 4751 Fungi Fungi 80.5 1.35e-10   NTclustered gi|2324008204|ref|XM_051539520.1| 61397 g27623 i0 80.952 2.0031847133758 105 16 33 4 34 136 635 737 Kickxella alabastrina ribosomal protein L6, alpha-beta domain-containing protein (BX661DRAFT_85336), mRNA blastn 629 80.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
24953786 24953786 PRJNA752278_P_NODE_31440_length_305_cov_1.818966_g31237_i0 PRJNA752278 31440 305 1.818966 5.5478463 Kickxella alabastrina 61397 Fungi Fungi 150 9.8e-32   NTclustered gi|2323998193|ref|XM_051533362.1| 61397 g31237 i0 80.097 1.44262295081967 206 37 67 3 80 283 204 1 Kickxella alabastrina 60S ribosomal protein L21-A (BX661DRAFT_167737), partial mRNA blastn 440 150 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;