contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 726881 | 726881 | PRJNA752278_P_NODE_12941_length_414_cov_2.428152_g12738_i0 | PRJNA752278 | 12941 | 414 | 2.428152 | 10.05254928 | Desulfocurvibacter africanus | 873 | Bacteria | Bacteria | 93.5 | 2.35e-14 | NTclustered | gi|367460290|gb|CP003221.1| | 690850 | g12738 | i0 | 83.019 | 0.538647342995169 | 106 | 15 | 25 | 3 | 293 | 397 | 1384353 | 1384250 | Desulfocurvibacter africanus subsp. africanus str. Walvis Bay chromosome, complete genome | blastn | 223 | 93.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfocurvibacter | Desulfocurvibacter africanus | ||
| 727126 | 727126 | PRJNA752278_P_NODE_24641_length_329_cov_2.351562_g24438_i0 | PRJNA752278 | 24641 | 329 | 2.351562 | 7.73663898 | Thermodesulfomicrobium sp. WS | 3004129 | Bacteria | Bacteria | 230 | 1.3299999999999995e-55 | NTclustered | gi|2416254156|dbj|AP027130.1| | 3004129 | g24438 | i0 | 93.548 | 0.96048632218845 | 155 | 9 | 47 | 1 | 130 | 284 | 1879034 | 1879187 | Thermodesulfomicrobium sp. WS DNA, complete genome | blastn | 316 | 230 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Thermodesulfomicrobium | Thermodesulfomicrobium sp. WS | ||
| 727909 | 727909 | PRJNA752278_P_NODE_66541_length_261_cov_2.484043_g66338_i0 | PRJNA752278 | 66541 | 261 | 2.484043 | 6.48335223 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 460 | 3.3399999999999995e-125 | NTclustered | gi|2548467271|emb|OX636706.1| | 901 | g66338 | i0 | 98.467 | 1.93869731800766 | 261 | 4 | 100 | 0 | 1 | 261 | 317179 | 316919 | Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1 | blastn | 506 | 460 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 3278173 | 3278173 | PRJNA752278_P_NODE_108683_length_232_cov_2.207547_g108480_i0 | PRJNA752278 | 108683 | 232 | 2.207547 | 5.12150904 | Geomonas subterranea | 2847989 | Bacteria | Bacteria | 84.2 | 7.36e-12 | NTclustered | gi|2060227305|gb|CP077683.1| | 2847989 | g108480 | i0 | 97.917 | 21.7801724137931 | 48 | 1 | 21 | 0 | 185 | 232 | 2056574 | 2056621 | Geomonas subterranea strain RG2 chromosome, complete genome | blastn | 5053 | 84.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas subterranea | ||
| 7106123 | 7106123 | PRJNA752278_P_NODE_37306_length_289_cov_2.087963_g37103_i0 | PRJNA752278 | 37306 | 289 | 2.087963 | 6.03421307 | Desulfovibrio desulfuricans | 876 | Bacteria | Bacteria | 176 | 1.52e-39 | NTclustered | gi|2172810686|gb|CP077745.1| | 876 | g37103 | i0 | 97.115 | 4.00346020761246 | 104 | 3 | 36 | 0 | 186 | 289 | 1537879 | 1537776 | Desulfovibrio desulfuricans strain Edelweiss chromosome, complete genome | blastn | 1157 | 176 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio desulfuricans | ||
| 7578882 | 7578882 | PRJNA752278_P_NODE_43626_length_283_cov_1.580952_g43423_i0 | PRJNA752278 | 43626 | 283 | 1.580952 | 4.47409416 | Desulfobacter | 2289 | Bacteria | Bacteria | 512 | 9.97e-141 | NTclustered | gi|1583991466|gb|CP036313.1| | 2291 | g43423 | i0 | 99.296 | 258.201413427562 | 284 | 1 | 100 | 1 | 1 | 283 | 505215 | 504932 | Desulfobacter hydrogenophilus strain AcRS1 chromosome | blastn | 73071 | 512 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter hydrogenophilus | ||
| 8381250 | 8381250 | PRJNA752278_P_NODE_66527_length_261_cov_2.590426_g66324_i0 | PRJNA752278 | 66527 | 261 | 2.590426 | 6.76101186 | Desulfovibrio sp. 86 | 2666132 | Bacteria | Bacteria | 189 | 1.7399999999999999e-43 | NTclustered | gi|1862956133|emb|LR738849.1| | 2666132 | g66324 | i0 | 81.048 | 5.6360153256705 | 248 | 37 | 93 | 7 | 19 | 261 | 2650868 | 2650626 | Desulfovibrio sp. 86 genome assembly, chromosome: DESU86 | blastn | 1471 | 189 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. 86 | ||
| 8381618 | 8381618 | PRJNA752278_P_NODE_87987_length_247_cov_1.373563_g87784_i0 | PRJNA752278 | 87987 | 247 | 1.373563 | 3.39270061 | Geoalkalibacter halelectricus | 2847045 | Bacteria | Bacteria | 185 | 2.11e-42 | NTclustered | gi|2304895958|gb|CP092109.1| | 2847045 | g87784 | i0 | 81.405 | 228.85020242915 | 242 | 32 | 96 | 11 | 1 | 237 | 1358830 | 1359063 | Geoalkalibacter halelectricus strain SAP-1 chromosome | blastn | 56526 | 185 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter halelectricus | ||
| 10129744 | 10129744 | PRJNA752278_P_NODE_65308_length_263_cov_1.021053_g65105_i0 | PRJNA752278 | 65308 | 263 | 1.021053 | 2.68536939 | Geobacter | 28231 | Bacteria | Bacteria | 470 | 5.59e-128 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g65105 | i0 | 98.859 | 9 | 263 | 3 | 100 | 0 | 1 | 263 | 2267691 | 2267429 | Geobacter sulfurreducens strain AM-1 genome | blastn | 2367 | 470 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 13482341 | 13482341 | PRJNA752278_P_NODE_96491_length_244_cov_0.900585_g96288_i0 | PRJNA752278 | 96491 | 244 | 0.900585 | 2.1974274 | uncultured Desulfobacterium sp. | 201089 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2621713419|emb|OY771474.1| | 201089 | g96288 | i0 | 100 | 261.045081967213 | 244 | 0 | 100 | 0 | 1 | 244 | 1187433 | 1187190 | MAG: uncultured Desulfobacterium sp. isolate 2c08e38e-77a0-468a-b8ca-c683eacf49f2 genome assembly, chromosome: 1 | blastn | 63695 | 451 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | uncultured Desulfobacterium sp. | ||
| 14757043 | 14757043 | PRJNA752278_P_NODE_77452_length_251_cov_1.528090_g77249_i0 | PRJNA752278 | 77452 | 251 | 1.52809 | 3.8355059 | uncultured Desulfobulbus sp. | 239745 | Bacteria | Bacteria | 431 | 2.4999999999999996e-116 | NTclustered | gi|2621704989|emb|OY762276.1| | 239745 | g77249 | i0 | 97.61 | 365.278884462151 | 251 | 6 | 100 | 0 | 1 | 251 | 155825 | 155575 | MAG: uncultured Desulfobulbus sp. isolate 57af8870-89a5-447c-908d-f2db64e05d28 genome assembly, chromosome: 1 | blastn | 91685 | 431 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | uncultured Desulfobulbus sp. | ||
| 14757247 | 14757247 | PRJNA752278_P_NODE_88252_length_247_cov_0.885057_g88049_i0 | PRJNA752278 | 88252 | 247 | 0.885057 | 2.18609079 | Oceanidesulfovibrio marinus | 370038 | Bacteria | Bacteria | 183 | 7.59e-42 | NTclustered | gi|1841667704|gb|CP039543.1| | 370038 | g88049 | i0 | 81.778 | 32.3724696356275 | 225 | 35 | 90 | 5 | 6 | 227 | 4052488 | 4052267 | Oceanidesulfovibrio marinus strain CS1 chromosome, complete genome | blastn | 7996 | 183 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Oceanidesulfovibrio | Oceanidesulfovibrio marinus | ||
| 16031074 | 16031074 | PRJNA752278_P_NODE_95713_length_244_cov_1.637427_g95510_i0 | PRJNA752278 | 95713 | 244 | 1.637427 | 3.99532188 | Desulfovibrio desulfuricans | 876 | Bacteria | Bacteria | 401 | 1.8999999999999998e-107 | NTclustered | gi|2884834435|gb|CP176628.1| | 876 | g95510 | i0 | 96.311 | 3 | 244 | 9 | 100 | 0 | 1 | 244 | 2130447 | 2130204 | Desulfovibrio desulfuricans strain SFAD67 chromosome, complete genome | blastn | 732 | 401 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio desulfuricans | ||
| 24953345 | 24953345 | PRJNA752278_P_NODE_109260_length_230_cov_2.414013_g109057_i0 | PRJNA752278 | 109260 | 230 | 2.414013 | 5.5522299 | Thermodesulfomicrobium sp. WS | 3004129 | Bacteria | Bacteria | 422 | 1.36e-113 | NTclustered | gi|2416254156|dbj|AP027130.1| | 3004129 | g109057 | i0 | 100 | 10.6217391304348 | 228 | 0 | 99 | 0 | 1 | 228 | 1902327 | 1902554 | Thermodesulfomicrobium sp. WS DNA, complete genome | blastn | 2443 | 422 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Thermodesulfomicrobium | Thermodesulfomicrobium sp. WS | ||
| 24954771 | 24954771 | PRJNA752278_P_NODE_81940_length_249_cov_2.482955_g81737_i0 | PRJNA752278 | 81940 | 249 | 2.482955 | 6.18255795 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 71.3 | 6.22e-8 | NTclustered | gi|2621786209|emb|OY782667.1| | 2049043 | g81737 | i0 | 97.561 | 8.54216867469879 | 41 | 1 | 16 | 0 | 208 | 248 | 658408 | 658448 | MAG: Desulfovibrionaceae bacterium isolate c63d6e66-0b86-4b38-bb75-751bde387f56 genome assembly, chromosome: 1 | blastn | 2127 | 71.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;