RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA752278 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2004395 2004395 PRJNA752278_P_NODE_88662_length_247_cov_0.885057_g88459_i0 PRJNA752278 88662 247 0.885057 2.18609079 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 457 4.05e-124   NTclustered gi|269099254|gb|CP001818.1| 525903 g88459 i0 100 13.0607287449393 247 0 100 0 1 247 614746 614992 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 3226 457 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
8381184 8381184 PRJNA752278_P_NODE_63567_length_264_cov_2.151832_g63364_i0 PRJNA752278 63567 264 2.151832 5.68083648 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 483 7.219999999999998e-132   NTclustered gi|269099254|gb|CP001818.1| 525903 g63364 i0 99.621 1.81060606060606 264 1 100 0 1 264 1741721 1741984 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 478 483 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
9655321 9655321 PRJNA752278_P_NODE_109888_length_228_cov_2.529032_g109685_i0 PRJNA752278 109888 228 2.529032 5.76619296 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 422 1.34e-113   NTclustered gi|269099254|gb|CP001818.1| 525903 g109685 i0 100 1 228 0 100 0 1 228 693473 693246 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 228 422 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
14755715 14755715 PRJNA752278_P_NODE_109892_length_228_cov_2.522581_g109689_i0 PRJNA752278 109892 228 2.522581 5.75148468 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 411 2.909999999999999e-110   NTclustered gi|269099254|gb|CP001818.1| 525903 g109689 i0 99.123 1 228 2 100 0 1 228 1168384 1168611 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 228 411 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
16030174 16030174 PRJNA752278_P_NODE_45093_length_282_cov_1.291866_g44890_i0 PRJNA752278 45093 282 1.291866 3.64306212 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 516 7.67e-142   NTclustered gi|269099254|gb|CP001818.1| 525903 g44890 i0 99.645 1.28368794326241 282 1 100 0 1 282 1391324 1391043 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 362 516 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
18579875 18579875 PRJNA752278_P_NODE_73655_length_254_cov_3.071823_g73452_i0 PRJNA752278 73655 254 3.071823 7.80243042 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 464 2.4999999999999994e-126   NTclustered gi|269099254|gb|CP001818.1| 525903 g73452 i0 99.606 1 254 1 100 0 1 254 95436 95183 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 254 464 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
19855408 19855408 PRJNA752278_P_NODE_86636_length_248_cov_0.880000_g86433_i0 PRJNA752278 86636 248 0.88 2.1824 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 459 1.13e-124   NTclustered gi|269099254|gb|CP001818.1| 525903 g86433 i0 100 1 248 0 100 0 1 248 1660846 1660599 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 248 459 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
24954363 24954363 PRJNA752278_P_NODE_61420_length_266_cov_2.113990_g61217_i0 PRJNA752278 61420 266 2.11399 5.6232134 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 470 5.669999999999999e-128   NTclustered gi|269099254|gb|CP001818.1| 525903 g61217 i0 98.496 1 266 4 100 0 1 266 1424622 1424357 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 266 470 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;