RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12206145 12206145 PRJNA752278_P_NODE_102130_length_242_cov_0.911243_g101927_i0 PRJNA752278 102130 242 0.911243 2.20520806 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 135 2.1e-27   NTclustered gi|14276850|gb|AF325131.1|AF325131 84397 g101927 i0 81.871 5.47933884297521 171 21 69 9 21 186 382 217 Asplanchna sieboldi 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 1326 135 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
21130145 21130145 PRJNA752278_P_NODE_457_length_1462_cov_5.569474_g351_i0 PRJNA752278 457 1462 5.569474 81.42570988 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 311 2.24e-79   NTclustered gi|2906176134|gb|PV021768.1| 2005548 g351 i0 71.505 34.5020519835841 1488 328 99 72 14 1455 5592 7029 Asplanchna brightwellii chromosome II mitochondrion, complete sequence blastn 50442 311 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;