contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3279500 | 3279500 | PRJNA752278_P_NODE_77943_length_251_cov_0.865169_g77740_i0 | PRJNA752278 | 77943 | 251 | 0.865169 | 2.17157419 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 217 | 7.619999999999999e-52 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g77740 | i0 | 82.677 | 4.77689243027888 | 254 | 35 | 99 | 9 | 2 | 251 | 5755027 | 5754779 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 1199 | 217 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 7106814 | 7106814 | PRJNA752278_P_NODE_76326_length_252_cov_1.530726_g76123_i0 | PRJNA752278 | 76326 | 252 | 1.530726 | 3.85742952 | Pseudomyxococcus hansupus | 1297742 | Bacteria | Bacteria | 163 | 1.01e-35 | NTclustered | gi|891158403|gb|CP012109.1| | 1297742 | g76123 | i0 | 92.174 | 12.3253968253968 | 115 | 9 | 46 | 0 | 101 | 215 | 8549655 | 8549541 | Myxococcus hansupus strain mixupus chromosome, complete genome | blastn | 3106 | 163 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pseudomyxococcus | Pseudomyxococcus hansupus | ||
| 8854008 | 8854008 | PRJNA752278_P_NODE_46667_length_280_cov_1.893720_g46464_i0 | PRJNA752278 | 46667 | 280 | 1.89372 | 5.302416 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|196170270|gb|CP001131.1| | 447217 | g46464 | i0 | 100 | 0.2 | 28 | 0 | 10 | 0 | 65 | 92 | 8666 | 8639 | Anaeromyxobacter sp. K, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. K | ||
| 9656360 | 9656360 | PRJNA752278_P_NODE_61668_length_266_cov_1.595855_g61465_i0 | PRJNA752278 | 61668 | 266 | 1.595855 | 4.2449743 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 276 | 1.33e-69 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g61465 | i0 | 85.551 | 1.18045112781955 | 263 | 38 | 99 | 0 | 4 | 266 | 7702217 | 7701955 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 314 | 276 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 10129991 | 10129991 | PRJNA752278_P_NODE_95008_length_244_cov_3.146199_g94805_i0 | PRJNA752278 | 95008 | 244 | 3.146199 | 7.67672556 | Myxococcus | 32 | Bacteria | Bacteria | 263 | 9.34e-66 | NTclustered | gi|1691485482|gb|CP017169.1| | 34 | g94805 | i0 | 86.066 | 17.6106557377049 | 244 | 34 | 100 | 0 | 1 | 244 | 6543905 | 6543662 | Myxococcus xanthus strain GH3.5.6c2 chromosome, complete genome | blastn | 4297 | 263 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 10931435 | 10931435 | PRJNA752278_P_NODE_41109_length_286_cov_1.112676_g40906_i0 | PRJNA752278 | 41109 | 286 | 1.112676 | 3.18225336 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 270 | 6.7e-68 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g40906 | i0 | 88.158 | 83.3426573426573 | 228 | 25 | 79 | 2 | 1 | 227 | 5377314 | 5377540 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 23836 | 270 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 10931710 | 10931710 | PRJNA752278_P_NODE_56229_length_271_cov_1.818182_g56026_i0 | PRJNA752278 | 56229 | 271 | 1.818182 | 4.92727322 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 257 | 4.9100000000000005e-64 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g56026 | i0 | 93.605 | 1.2619926199262 | 172 | 11 | 63 | 0 | 1 | 172 | 2176431 | 2176260 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 342 | 257 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 13481090 | 13481090 | PRJNA752278_P_NODE_30311_length_309_cov_4.567797_g30108_i0 | PRJNA752278 | 30311 | 309 | 4.567797 | 14.11449273 | Myxococcus stipitatus | 83455 | Bacteria | Bacteria | 60.2 | 1.72e-4 | NTclustered | gi|2722781719|gb|CP102770.1| | 83455 | g30108 | i0 | 100 | 0.294498381877023 | 32 | 0 | 10 | 0 | 207 | 238 | 5815623 | 5815592 | Myxococcus stipitatus strain YRE12 chromosome, complete genome | blastn | 91 | 60.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus stipitatus | ||
| 13481101 | 13481101 | PRJNA752278_P_NODE_30931_length_307_cov_1.974359_g30728_i0 | PRJNA752278 | 30931 | 307 | 1.974359 | 6.06128213 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 106 | 2.17e-18 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g30728 | i0 | 80 | 14.4071661237785 | 175 | 10 | 53 | 16 | 1 | 158 | 10585720 | 10585554 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 4423 | 106 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 13954919 | 13954919 | PRJNA752278_P_NODE_46171_length_281_cov_1.177885_g45968_i0 | PRJNA752278 | 46171 | 281 | 1.177885 | 3.30985685 | Myxococcus | 32 | Bacteria | Bacteria | 475 | 1.2999999999999999e-129 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g45968 | i0 | 97.153 | 34.9608540925267 | 281 | 8 | 100 | 0 | 1 | 281 | 901959 | 901679 | Myxococcus xanthus strain DK1050 chromosome | blastn | 9824 | 475 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 14755771 | 14755771 | PRJNA752278_P_NODE_12552_length_418_cov_37.144928_g12349_i0 | PRJNA752278 | 12552 | 418 | 37.144928 | 155.26579904 | uncultured Polyangium sp. | 211930 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|290565305|gb|GU556371.1| | 211930 | g12349 | i0 | 95.215 | 113.322966507177 | 418 | 19 | 99 | 1 | 2 | 418 | 1 | 418 | Uncultured Polyangium sp. clone 156 16S ribosomal RNA gene, partial sequence | blastn | 47369 | 664 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | uncultured Polyangium sp. | |||
| 17304934 | 17304934 | PRJNA752278_P_NODE_110534_length_226_cov_2.516340_g110331_i0 | PRJNA752278 | 110534 | 226 | 2.51634 | 5.6869284 | Pseudomyxococcus hansupus | 1297742 | Bacteria | Bacteria | 246 | 8.599999999999998e-61 | NTclustered | gi|891158403|gb|CP012109.1| | 1297742 | g110331 | i0 | 86.283 | 21.0265486725664 | 226 | 31 | 100 | 0 | 1 | 226 | 4097209 | 4097434 | Myxococcus hansupus strain mixupus chromosome, complete genome | blastn | 4752 | 246 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pseudomyxococcus | Pseudomyxococcus hansupus | ||
| 17305720 | 17305720 | PRJNA752278_P_NODE_48714_length_278_cov_2.073171_g48511_i0 | PRJNA752278 | 48714 | 278 | 2.073171 | 5.76341538 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 409 | 1.32e-109 | NTclustered | gi|13959795|gb|AY033402.1| | 34 | g48511 | i0 | 92.069 | 26.0359712230216 | 290 | 11 | 100 | 12 | 1 | 278 | 3267 | 2978 | Myxococcus xanthus USC2-1p, USC2-2p, USC2-3p, USC2-4p, USC2-5p, and USC2-6p genes, complete cds | blastn | 7238 | 409 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 18579431 | 18579431 | PRJNA752278_P_NODE_51895_length_275_cov_2.049505_g51692_i0 | PRJNA752278 | 51895 | 275 | 2.049505 | 5.63613875 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 193 | 1.43e-44 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g51692 | i0 | 85.484 | 8.32 | 186 | 25 | 67 | 2 | 91 | 275 | 1369281 | 1369097 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 2288 | 193 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 19854983 | 19854983 | PRJNA752278_P_NODE_64616_length_263_cov_2.047368_g64413_i0 | PRJNA752278 | 64616 | 263 | 2.047368 | 5.38457784 | Archangium gephyra | 48 | Bacteria | Bacteria | 287 | 6.05e-73 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g64413 | i0 | 86.312 | 67.851711026616 | 263 | 36 | 100 | 0 | 1 | 263 | 9729266 | 9729004 | Archangium gephyra strain DSM 2261, complete genome | blastn | 17845 | 287 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 20327732 | 20327732 | PRJNA752278_P_NODE_88556_length_247_cov_0.885057_g88353_i0 | PRJNA752278 | 88556 | 247 | 0.885057 | 2.18609079 | Myxococcus | 32 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g88353 | i0 | 99.595 | 21.0566801619433 | 247 | 1 | 100 | 0 | 1 | 247 | 8587710 | 8587464 | Myxococcus xanthus strain DK1050 chromosome | blastn | 5201 | 451 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 22404136 | 22404136 | PRJNA752278_P_NODE_105418_length_241_cov_0.916667_g105215_i0 | PRJNA752278 | 105418 | 241 | 0.916667 | 2.20916747 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g105215 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 135 | 162 | 1055748 | 1055775 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 22405361 | 22405361 | PRJNA752278_P_NODE_68298_length_260_cov_1.310160_g68095_i0 | PRJNA752278 | 68298 | 260 | 1.31016 | 3.406416 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 475 | 1.1899999999999999e-129 | NTclustered | gi|13959795|gb|AY033402.1| | 34 | g68095 | i0 | 99.617 | 100.034615384615 | 261 | 0 | 100 | 1 | 1 | 260 | 2260 | 2520 | Myxococcus xanthus USC2-1p, USC2-2p, USC2-3p, USC2-4p, USC2-5p, and USC2-6p genes, complete cds | blastn | 26009 | 475 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 23680581 | 23680581 | PRJNA752278_P_NODE_47559_length_279_cov_2.373786_g47356_i0 | PRJNA752278 | 47559 | 279 | 2.373786 | 6.62286294 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 167 | 8.789999999999999e-37 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g47356 | i0 | 85.535 | 16.8028673835125 | 159 | 23 | 57 | 0 | 121 | 279 | 11771435 | 11771277 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 4688 | 167 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 23680724 | 23680724 | PRJNA752278_P_NODE_55119_length_272_cov_1.934673_g54916_i0 | PRJNA752278 | 55119 | 272 | 1.934673 | 5.26231056 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 494 | 3.45e-135 | NTclustered | gi|13959815|gb|AY033407.1| | 34 | g54916 | i0 | 99.631 | 99.25 | 271 | 0 | 99 | 1 | 1 | 270 | 2912 | 2642 | Myxococcus xanthus USC7-1p and USC7-2p genes, complete cds | blastn | 26996 | 494 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;