RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2475910 2475910 PRJNA752278_P_NODE_101962_length_242_cov_0.911243_g101759_i0 PRJNA752278 101962 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 248 2.59e-61   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g101759 i0 99.27 30.0619834710744 137 1 57 0 106 242 805812 805948 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 7275 248 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
12206998 12206998 PRJNA752278_P_NODE_45610_length_281_cov_1.985577_g45407_i0 PRJNA752278 45610 281 1.985577 5.57947137 Ignavibacteria bacterium 2053306 Bacteria Bacteria 342 1.3699999999999997e-89   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g45407 i0 88.652 635.597864768683 282 30 100 2 1 281 873281 873561 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 178603 342 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;