contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2003981 | 2003981 | PRJNA752278_P_NODE_65662_length_262_cov_2.074074_g65459_i0 | PRJNA752278 | 65662 | 262 | 2.074074 | 5.43407388 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 231 | 2.8599999999999996e-56 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g65459 | i0 | 82.879 | 57.1221374045802 | 257 | 44 | 98 | 0 | 5 | 261 | 2562871 | 2563127 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 14966 | 231 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 2004064 | 2004064 | PRJNA752278_P_NODE_69942_length_258_cov_1.664865_g69739_i0 | PRJNA752278 | 69942 | 258 | 1.664865 | 4.2953517 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 298 | 2.73e-76 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g69739 | i0 | 87.645 | 46.9302325581395 | 259 | 29 | 100 | 3 | 1 | 258 | 1101976 | 1102232 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 12108 | 298 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 9655840 | 9655840 | PRJNA752278_P_NODE_34768_length_293_cov_2.745455_g34565_i0 | PRJNA752278 | 34768 | 293 | 2.745455 | 8.04418315 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 283 | 8.849999999999999e-72 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g34565 | i0 | 84.828 | 34.4607508532423 | 290 | 34 | 98 | 9 | 3 | 289 | 3042327 | 3042609 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 10097 | 283 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10931412 | 10931412 | PRJNA752278_P_NODE_3949_length_635_cov_1.507117_g3751_i0 | PRJNA752278 | 3949 | 635 | 1.507117 | 9.57019295 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 547 | 6.6e-151 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g3751 | i0 | 83.172 | 229.433070866142 | 618 | 85 | 96 | 18 | 27 | 635 | 1102704 | 1103311 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 145690 | 547 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 13482079 | 13482079 | PRJNA752278_P_NODE_83031_length_249_cov_0.875000_g82828_i0 | PRJNA752278 | 83031 | 249 | 0.875 | 2.17875 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 289 | 1.58e-73 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g82828 | i0 | 88.163 | 128.481927710843 | 245 | 25 | 98 | 4 | 7 | 249 | 802654 | 802412 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 31992 | 289 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 18579937 | 18579937 | PRJNA752278_P_NODE_77135_length_251_cov_1.730337_g76932_i0 | PRJNA752278 | 77135 | 251 | 1.730337 | 4.34314587 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 215 | 2.74e-51 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g76932 | i0 | 82.845 | 84.3187250996016 | 239 | 41 | 95 | 0 | 11 | 249 | 1624257 | 1624495 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 21164 | 215 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 23680199 | 23680199 | PRJNA752278_P_NODE_29119_length_310_cov_3.248945_g28916_i0 | PRJNA752278 | 29119 | 310 | 3.248945 | 10.0717295 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 180 | 1.27e-40 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g28916 | i0 | 91.045 | 29.4870967741935 | 134 | 10 | 84 | 2 | 18 | 150 | 3042668 | 3042536 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 9141 | 180 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 23680491 | 23680491 | PRJNA752278_P_NODE_42859_length_284_cov_1.360190_g42656_i0 | PRJNA752278 | 42859 | 284 | 1.36019 | 3.8629396 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 424 | 4.82e-114 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g42656 | i0 | 93.972 | 63.1619718309859 | 282 | 13 | 99 | 4 | 5 | 284 | 3043516 | 3043237 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 17938 | 424 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 23681006 | 23681006 | PRJNA752278_P_NODE_72059_length_256_cov_1.683060_g71856_i0 | PRJNA752278 | 72059 | 256 | 1.68306 | 4.3086336 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 268 | 2.1199999999999998e-67 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g71856 | i0 | 85.603 | 1.2265625 | 257 | 35 | 100 | 2 | 1 | 256 | 4421842 | 4422097 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 314 | 268 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24953230 | 24953230 | PRJNA752278_P_NODE_103140_length_241_cov_2.422619_g102937_i0 | PRJNA752278 | 103140 | 241 | 2.422619 | 5.83851179 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 150 | 7.48e-32 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g102937 | i0 | 85.816 | 15.9294605809129 | 141 | 20 | 59 | 0 | 1 | 141 | 127421 | 127281 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 3839 | 150 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;