RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
726933 726933 PRJNA752278_P_NODE_1561_length_895_cov_7.352798_g1388_i0 PRJNA752278 1561 895 7.352798 65.8075421 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 508 4.46e-139   NTclustered gi|339759377|dbj|AB600301.1| 926446 g1388 i0 79.888 78.7776536312849 716 127 79 14 189 895 1279 572 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 70506 508 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
23680484 23680484 PRJNA752278_P_NODE_42519_length_284_cov_1.886256_g42316_i0 PRJNA752278 42519 284 1.886256 5.35696704 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 375 1.3699999999999999e-99   NTclustered gi|339759363|dbj|AB600294.1| 201153 g42316 i0 90.493 98.0492957746479 284 27 100 0 1 284 33 316 Carpediemonas membranifera gene for alpha-tubulin, partial cds, strain: BICM blastn 27846 375 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;