RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7105431 7105431 PRJNA752278_P_NODE_103066_length_241_cov_2.690476_g102863_i0 PRJNA752278 103066 241 2.690476 6.48404716 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.022   NTclustered gi|1229143317|ref|XM_022228207.1| 133434 g102863 i0 100 0.116182572614108 28 0 12 0 199 226 2598 2571 PREDICTED: Acanthaster planci uncharacterized LOC110975609 (LOC110975609), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
7106044 7106044 PRJNA752278_P_NODE_33146_length_298_cov_2.764444_g32943_i0 PRJNA752278 33146 298 2.764444 8.23804312 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.008   NTclustered gi|2707408190|ref|XM_064110525.1| 7653 g32943 i0 100 0.389261744966443 29 0 10 0 147 175 975 947 PREDICTED: Lytechinus pictus trithorax group protein osa-like (LOC129254753), transcript variant X4, mRNA blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
10130004 10130004 PRJNA752278_P_NODE_9708_length_459_cov_2.699482_g9505_i0 PRJNA752278 9708 459 2.699482 12.39062238 Metazoa 33208 Echinodermata other_Eukaryota 56.5 0.003   NTclustered gi|2037971343|ref|XR_005968863.1| 7654 g9505 i0 96.97 1.44662309368192 33 1 7 0 193 225 1729 1761 PREDICTED: Lytechinus variegatus serine/threonine-protein kinase PRP4 homolog (LOC121407030), transcript variant X2, misc_RNA blastn 664 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
18578617 18578617 PRJNA752278_P_NODE_12055_length_425_cov_1.312500_g11852_i0 PRJNA752278 12055 425 1.3125 5.578125 Diadema antillarum 105358 Echinodermata other_Eukaryota 58.4 8.8e-4   NTclustered gi|2919362478|ref|XM_071638554.1| 105358 g11852 i0 97.059 0.16 34 1 8 0 97 130 667 700 PREDICTED: Diadema antillarum uncharacterized protein (LOC139727569), mRNA blastn 68 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;