RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA752278 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5831579 5831579 PRJNA752278_P_NODE_67505_length_260_cov_2.839572_g67302_i0 PRJNA752278 67505 260 2.839572 7.3828872 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 448 2.5899999999999996e-121   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g67302 i0 97.692 1.18076923076923 260 6 100 0 1 260 2745 3004 Malassezia restricta virus MrV40L, complete genome blastn 307 448 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
13482379 13482379 PRJNA752278_P_NODE_98931_length_243_cov_0.905882_g98728_i0 PRJNA752278 98931 243 0.905882 2.20129326 Malassezia restricta virus MrV40S 2727864 Viruses Viruses 254 5.59e-63   NTclustered gi|1832308146|gb|MN603498.1| 2727864 g98728 i0 96.711 0.625514403292181 152 5 63 0 92 243 1104 953 Malassezia restricta virus MrV40S, complete genome blastn 152 254 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
19854898 19854898 PRJNA752278_P_NODE_60476_length_267_cov_1.670103_g60273_i0 PRJNA752278 60476 267 1.670103 4.45917501 Varroa dicistrovirus 1 2873561 Viruses Viruses 457 4.43e-124   NTclustered gi|2111829789|gb|MZ822069.1| 2873561 g60273 i0 97.398 1.00749063670412 269 5 100 2 1 267 10076 9808 MAG: Varroa dicistrovirus 1 isolate No3-Mi012-HB2018-11, complete genome blastn 269 457 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Varroa dicistrovirus 1
21129532 21129532 PRJNA752278_P_NODE_15377_length_389_cov_2.797468_g15174_i0 PRJNA752278 15377 389 2.797468 10.88215052 Capillovirus alphavii 3427714 Viruses Viruses 702 0   NTclustered gi|1191450664|gb|KY510892.1| 42882 g15174 i0 99.229 99.7917737789203 389 3 100 0 1 389 6834 7222 Cherry virus A isolate 3137 9A1/13TF101_N33, complete genome blastn 38819 702 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus alphavii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;