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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA752278" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 31 ✖

bioproject 1

  • PRJNA752278 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
727262 727262 PRJNA752278_P_NODE_31921_length_303_cov_2.000000_g31718_i0 PRJNA752278 31921 303 2 6.06 Auxenochlorella protothecoides 3075 Plants Plants 75 6.02e-9   NTclustered gi|760445150|ref|XM_011401342.1| 3075 g31718 i0 90.909 1.24092409240924 55 5 18 0 48 102 521 575 Auxenochlorella protothecoides 40S ribosomal protein S6 partial mRNA blastn 376 75 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
728325 728325 PRJNA752278_P_NODE_8821_length_476_cov_3.069479_g8618_i0 PRJNA752278 8821 476 3.069479 14.61072004 Coccomyxa subellipsoidea 248742 Plants Plants 211 7.22e-50   NTclustered gi|545360614|ref|XM_005645617.1| 574566 g8618 i0 78.834 26.8067226890756 326 59 67 7 1 321 1589 1909 Coccomyxa subellipsoidea C-169 EMP/nonaspanin domain family protein partial mRNA blastn 12760 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
1201035 1201035 PRJNA752278_P_NODE_53001_length_274_cov_1.990050_g52798_i0 PRJNA752278 53001 274 1.99005 5.452737 Eukaryota 2759 Plants Plants 52.8 0.025   NTclustered gi|2082253072|ref|XM_043065249.1| 3055 g52798 i0 100 0.204379562043796 28 0 10 0 38 65 6267 6294 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g380151v5), mRNA blastn 56 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2002788 2002788 PRJNA752278_P_NODE_106502_length_238_cov_2.454545_g106299_i0 PRJNA752278 106502 238 2.454545 5.8418171 Chlamydomonas reinhardtii 3055 Plants Plants 440 3.899999999999999e-119   NTclustered gi|2082241200|ref|XM_043060409.1| 3055 g106299 i0 100 4.00420168067227 238 0 100 0 1 238 13626 13389 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g145127v5), mRNA blastn 953 440 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3278064 3278064 PRJNA752278_P_NODE_103523_length_241_cov_1.767857_g103320_i0 PRJNA752278 103523 241 1.767857 4.26053537 Auxenochlorella protothecoides 3075 Plants Plants 78.7 3.58e-10   NTclustered gi|760445274|ref|XM_011401404.1| 3075 g103320 i0 84.146 3.32365145228216 82 11 34 2 160 240 96 16 Auxenochlorella protothecoides Polyadenylate-binding protein 4 partial mRNA blastn 801 78.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
3279206 3279206 PRJNA752278_P_NODE_63063_length_265_cov_1.343750_g62860_i0 PRJNA752278 63063 265 1.34375 3.5609375 Myrmecia israelensis 3171 Plants Plants 135 2.3400000000000003e-27   NTclustered gi|723456786|ref|NC_025525.1| 3171 g62860 i0 85.315 0.656603773584906 143 8 66 6 3 145 20043 20172 Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome blastn 174 135 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis
3279859 3279859 PRJNA752278_P_NODE_983_length_1070_cov_22.344032_g834_i0 PRJNA752278 983 1070 22.344032 239.0811424 Chlorella variabilis 554065 Plants Plants 353 2.66e-92   NTclustered gi|552809741|ref|XM_005842957.1| 554065 g834 i0 79.191 43.3495327102804 519 100 48 8 72 586 43 557 Chlorella variabilis hypothetical protein (CHLNCDRAFT_33302) mRNA, complete cds blastn 46384 353 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4555633 4555633 PRJNA752278_P_NODE_24864_length_328_cov_1.811765_g24661_i0 PRJNA752278 24864 328 1.811765 5.9425892 Chlamydomonas reinhardtii 3055 Plants Plants 233 1.03e-56   NTclustered gi|2082238813|ref|XM_001701728.2| 3055 g24661 i0 80.503 6.48170731707317 318 51 95 10 1 311 541 228 Chlamydomonas reinhardtii ribosomal protein L15 (CHLRE_02g091100v5), mRNA blastn 2126 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4555685 4555685 PRJNA752278_P_NODE_27384_length_316_cov_2.386831_g27181_i0 PRJNA752278 27384 316 2.386831 7.54238596 Chlamydomonas reinhardtii 3055 Plants Plants 80.5 1.36e-10   NTclustered gi|2082265983|ref|XM_043070553.1| 3055 g27181 i0 79.825 0.360759493670886 114 19 35 4 112 223 1899 2010 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_15g637100v5), mRNA blastn 114 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5830744 5830744 PRJNA752278_P_NODE_23545_length_335_cov_1.465649_g23342_i0 PRJNA752278 23545 335 1.465649 4.90992415 Chlamydomonas reinhardtii 3055 Plants Plants 246 1.35e-60   NTclustered gi|2082253415|ref|XM_001695125.2| 3055 g23342 i0 80 82.3970149253731 335 65 99 2 1 334 492 825 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386650v5), mRNA blastn 27603 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5830934 5830934 PRJNA752278_P_NODE_33545_length_297_cov_1.937500_g33342_i0 PRJNA752278 33545 297 1.9375 5.754375 Monoraphidium neglectum 145388 Plants Plants 207 5.5600000000000004e-49   NTclustered gi|926781757|ref|XM_014043899.1| 145388 g33342 i0 82.833 12.2020202020202 233 39 78 1 1 232 167 399 Monoraphidium neglectum 60S ribosomal protein mRNA blastn 3624 207 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7105892 7105892 PRJNA752278_P_NODE_25166_length_327_cov_1.200787_g24963_i0 PRJNA752278 25166 327 1.200787 3.92657349 Monoraphidium neglectum 145388 Plants Plants 58.4 6.61e-4   NTclustered gi|926797850|ref|XM_014050895.1| 145388 g24963 i0 89.13 0.140672782874618 46 5 14 0 6 51 2321 2276 Monoraphidium neglectum hypothetical protein mRNA blastn 46 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
10129451 10129451 PRJNA752278_P_NODE_32028_length_303_cov_1.269565_g31825_i0 PRJNA752278 32028 303 1.269565 3.84678195 Chlorellaceae 35461 Plants Plants 529 1.0699999999999996e-145   NTclustered gi|555946181|gb|KF554428.1| 1415603 g31825 i0 98.983 93.5544554455445 295 3 97 0 4 298 43216 43510 Chlorella sp. ArM0029B mitochondrion, complete genome blastn 28347 529 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp. ArM0029B
12207026 12207026 PRJNA752278_P_NODE_47210_length_280_cov_1.260870_g47007_i0 PRJNA752278 47210 280 1.26087 3.530436 Chlorella variabilis 554065 Plants Plants 174 5.28e-39   NTclustered gi|552840787|ref|XM_005850079.1| 554065 g47007 i0 85.799 1.71071428571429 169 18 59 4 2 167 222 57 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59606) mRNA, complete cds blastn 479 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
12207617 12207617 PRJNA752278_P_NODE_78230_length_251_cov_0.865169_g78027_i0 PRJNA752278 78230 251 0.865169 2.17157419 Chlamydomonas reinhardtii 3055 Plants Plants 200 7.679999999999999e-47   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g78027 i0 83.333 24.2470119521912 216 36 86 0 4 219 374 159 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 6086 200 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13480831 13480831 PRJNA752278_P_NODE_17871_length_370_cov_1.441077_g17668_i0 PRJNA752278 17871 370 1.441077 5.3319849 Monoraphidium neglectum 145388 Plants Plants 272 2.48e-68   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g17668 i0 82.298 86.9756756756757 322 50 86 7 50 369 2027 1711 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 32181 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
13482374 13482374 PRJNA752278_P_NODE_98731_length_243_cov_1.229412_g98528_i0 PRJNA752278 98731 243 1.229412 2.98747116 Chlamydomonas reinhardtii 3055 Plants Plants 442 1.1099999999999995e-119   NTclustered gi|2082259086|ref|XM_001697336.2| 3055 g98528 i0 99.587 98.1604938271605 242 1 99 0 2 243 474 233 Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA blastn 23853 442 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14755890 14755890 PRJNA752278_P_NODE_18372_length_366_cov_2.197952_g18169_i0 PRJNA752278 18372 366 2.197952 8.04450432 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 7.47e-4   NTclustered gi|2082238366|ref|XM_043059241.1| 3055 g18169 i0 89.13 0.12568306010929 46 5 13 0 189 234 1556 1511 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g081250v5), mRNA blastn 46 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14756017 14756017 PRJNA752278_P_NODE_23852_length_333_cov_2.057692_g23649_i0 PRJNA752278 23852 333 2.057692 6.85211436 Volvox carteri 3067 Plants Plants 54.7 0.009   NTclustered gi|302849247|ref|XM_002956108.1| 3068 g23649 i0 100 0.0870870870870871 29 0 9 0 297 325 1159 1131 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_97107), partial mRNA blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
14756374 14756374 PRJNA752278_P_NODE_41652_length_285_cov_1.627358_g41449_i0 PRJNA752278 41652 285 1.627358 4.6379703 Chlamydomonas reinhardtii 3055 Plants Plants 167 9.01e-37   NTclustered gi|2082237163|ref|XM_043058766.1| 3055 g41449 i0 77.431 7.47017543859649 288 59 100 6 1 285 615 331 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g039250v5), mRNA blastn 2129 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17305363 17305363 PRJNA752278_P_NODE_2994_length_702_cov_1.732909_g2803_i0 PRJNA752278 2994 702 1.732909 12.16502118 Chlamydomonas incerta 51695 Plants Plants 472 4.539999999999999e-128   NTclustered gi|74272614|gb|DQ122872.1| 51695 g2803 i0 79.643 99.1851851851852 673 124 96 6 1 671 947 286 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 69628 472 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
17306002 17306002 PRJNA752278_P_NODE_62754_length_265_cov_1.604167_g62551_i0 PRJNA752278 62754 265 1.604167 4.25104255 Myrmecia israelensis 3171 Plants Plants 488 1.5599999999999996e-133   NTclustered gi|723456786|ref|NC_025525.1| 3171 g62551 i0 100 97.5924528301887 264 0 99 0 2 265 77461 77198 Myrmecia israelensis culture-collection UTEX:1181 chloroplast, complete genome blastn 25862 488 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis
18578738 18578738 PRJNA752278_P_NODE_17875_length_370_cov_1.397306_g17672_i0 PRJNA752278 17875 370 1.397306 5.1700322 Coccomyxa subellipsoidea 248742 Plants Plants 193 1.99e-44   NTclustered gi|545363001|ref|XM_005646641.1| 574566 g17672 i0 80.074 11.3540540540541 271 44 72 9 76 341 5305 5040 Coccomyxa subellipsoidea C-169 Not1-domain-containing protein partial mRNA blastn 4201 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
18578964 18578964 PRJNA752278_P_NODE_2775_length_724_cov_1.267281_g2584_i0 PRJNA752278 2775 724 1.267281 9.17511444 Chlorella variabilis 554065 Plants Plants 486 1.6799999999999998e-132   NTclustered gi|552846838|ref|XM_005851654.1| 554065 g2584 i0 80.149 68.7030386740332 670 117 91 16 62 723 1341 680 Chlorella variabilis hypothetical protein (CHLNCDRAFT_29172) mRNA, complete cds blastn 49741 486 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
22404416 22404416 PRJNA752278_P_NODE_19818_length_356_cov_1.946996_g19615_i0 PRJNA752278 19818 356 1.946996 6.93130576 Chlamydomonas reinhardtii 3055 Plants Plants 237 8.67e-58   NTclustered gi|2082266802|ref|XM_043070809.1| 3055 g19615 i0 80.251 38.5168539325843 319 59 89 4 1 317 2103 1787 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g651750v5), mRNA blastn 13712 237 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22405741 22405741 PRJNA752278_P_NODE_88298_length_247_cov_0.885057_g88095_i0 PRJNA752278 88298 247 0.885057 2.18609079 Chlorella variabilis 554065 Plants Plants 139 1.67e-28   NTclustered gi|552847345|ref|XM_005851779.1| 554065 g88095 i0 77.922 4.17813765182186 231 45 92 6 1 228 512 285 Chlorella variabilis hypothetical protein (CHLNCDRAFT_133342) mRNA, complete cds blastn 1032 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
22878838 22878838 PRJNA752278_P_NODE_84498_length_248_cov_2.582857_g84295_i0 PRJNA752278 84498 248 2.582857 6.40548536 root 1 Root_unresolved Root_unresolved 52.8 0.022   NTclustered gi|2082247972|ref|XM_043063157.1| 3055 g84295 i0 100 1.56048387096774 28 0 11 0 99 126 1924 1897 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278234v5), mRNA blastn 387 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23680907 23680907 PRJNA752278_P_NODE_6599_length_528_cov_2.147253_g6396_i0 PRJNA752278 6599 528 2.147253 11.33749584 Chlorella variabilis 554065 Plants Plants 106 3.92e-18   NTclustered gi|552847359|ref|XM_005851783.1| 554065 g6396 i0 91.139 4.54734848484848 79 6 15 1 257 334 276 354 Chlorella variabilis hypothetical protein (CHLNCDRAFT_48411) mRNA, complete cds blastn 2401 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
23680990 23680990 PRJNA752278_P_NODE_71199_length_257_cov_1.559783_g70996_i0 PRJNA752278 71199 257 1.559783 4.00864231 Chlamydomonas reinhardtii 3055 Plants Plants 132 2.9200000000000003e-26   NTclustered gi|1167827|emb|X95314.1| 3055 g70996 i0 81.935 7.56809338521401 155 28 60 0 78 232 290 136 C.reinhardtii mRNA for ribosomal protein L12 blastn 1945 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23681019 23681019 PRJNA752278_P_NODE_72959_length_255_cov_1.972527_g72756_i0 PRJNA752278 72959 255 1.972527 5.02994385 Gonium pectorale 33097 Plants Plants 438 1.52e-118   NTclustered gi|459314754|ref|NC_020438.1| 33097 g72756 i0 97.647 134.262745098039 255 6 100 0 1 255 47551 47297 Gonium pectorale chloroplast, complete genome blastn 34237 438 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
24953958 24953958 PRJNA752278_P_NODE_40380_length_286_cov_2.112676_g40177_i0 PRJNA752278 40380 286 2.112676 6.04225336 Chlamydomonas reinhardtii 3055 Plants Plants 95.3 4.33e-15   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g40177 i0 82.857 0.367132867132867 105 18 37 0 21 125 652 756 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 105 95.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;