RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA751877" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA751877 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
726443 726443 PRJNA751877_P_NODE_26941_length_245_cov_0.895349_g26819_i0 PRJNA751877 26941 245 0.895349 2.19360505 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 224 4.43e-54   NTclustered gi|2874253948|emb|OY970273.1| 100233 g26819 i0 83.197 11.8775510204082 244 41 99 0 2 245 6246643 6246400 MAG: uncultured Planctomycetaceae bacterium isolate MFD09495.bin.c.1 genome assembly, chromosome: 1 blastn 2910 224 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
2002144 2002144 PRJNA751877_P_NODE_10962_length_336_cov_2.144487_g10840_i0 PRJNA751877 10962 336 2.144487 7.20547632 Tautonia plasticadhaerens 2527974 Bacteria Bacteria 604 1.9399999999999992e-168   NTclustered gi|1712713678|gb|CP036426.1| 2527974 g10840 i0 99.107 171.071428571429 336 3 100 0 1 336 267608 267943 Tautonia plasticadhaerens strain ElP chromosome blastn 57480 604 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia plasticadhaerens
5830152 5830152 PRJNA751877_P_NODE_365_length_1120_cov_2.945559_g280_i0 PRJNA751877 365 1120 2.945559 32.9902608 Tautonia plasticadhaerens 2527974 Bacteria Bacteria 2002 0   NTclustered gi|1712713678|gb|CP036426.1| 2527974 g280 i0 98.929 240.295535714286 1120 12 100 0 1 1120 266593 265474 Tautonia plasticadhaerens strain ElP chromosome blastn 269131 2002 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia plasticadhaerens
18578259 18578259 PRJNA751877_P_NODE_3575_length_485_cov_1.881068_g3453_i0 PRJNA751877 3575 485 1.881068 9.1231798 Limnoglobus roseus 2598579 Bacteria Bacteria 58.4 0.001   NTclustered gi|1733446852|gb|CP042425.1| 2598579 g3453 i0 100 0.0639175257731959 31 0 6 0 395 425 7374488 7374518 Limnoglobus roseus strain PX52 chromosome, complete genome blastn 31 58.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Limnoglobus Limnoglobus roseus
22403799 22403799 PRJNA751877_P_NODE_25238_length_247_cov_1.419540_g25116_i0 PRJNA751877 25238 247 1.41954 3.5062638 Planctomyces sp. SH-PL62 1636152 Bacteria Bacteria 313 9.28e-81   NTclustered gi|1015454008|gb|CP011273.1| 1636152 g25116 i0 90.041 0.975708502024291 241 24 98 0 2 242 6472399 6472639 Planctomyces sp. SH-PL62, complete genome blastn 241 313 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp. SH-PL62
24152020 24152020 PRJNA751877_P_NODE_5399_length_424_cov_1.754986_g5277_i0 PRJNA751877 5399 424 1.754986 7.44114064 Engelhardtia 139931 Bacteria Bacteria 58.4 8.78e-4   NTclustered gi|1712638177|gb|CP036287.1| 2528011 g5277 i0 92.5 0.188679245283019 40 3 9 0 278 317 5427271 5427310 Planctomycetes bacterium Pla133 chromosome, complete genome blastn 80 58.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia     Engelhardtia Engelhardtia mirabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;