RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA751877" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA751877 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3277902 3277902 PRJNA751877_P_NODE_4603_length_447_cov_2.863636_g4481_i0 PRJNA751877 4603 447 2.863636 12.80045292 Rhizomucor pusillus 4840 Fungi Fungi 200 1.4599999999999999e-46   NTclustered gi|2837731086|ref|XM_069388369.1| 4840 g4481 i0 82.051 36.751677852349 234 42 52 0 4 237 34 267 Rhizomucor pusillus 60S ribosomal protein eL43 (VTP01DRAFT_9167), partial mRNA blastn 16428 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
17304734 17304734 PRJNA751877_P_NODE_9394_length_354_cov_1.978648_g9272_i0 PRJNA751877 9394 354 1.978648 7.00441392 Gamsiella multidivaricata 101098 Fungi Fungi 209 1.88e-49   NTclustered gi|2323795724|ref|XM_051557003.1| 101098 g9272 i0 78.638 23.364406779661 323 63 90 3 3 322 50 369 Gamsiella multidivaricata ribosomal protein L24 (BC939DRAFT_461274), mRNA blastn 8271 209 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
19853305 19853305 PRJNA751877_P_NODE_16096_length_289_cov_1.425926_g15974_i0 PRJNA751877 16096 289 1.425926 4.12092614 Mucor mucedo 29922 Fungi Fungi 60.2 1.6e-4   NTclustered gi|2324051478|ref|XM_051597657.1| 29922 g15974 i0 93.023 0.660899653979239 43 0 14 3 234 273 544 586 Mucor mucedo uncharacterized protein (EV154DRAFT_464253), partial mRNA blastn 191 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;