RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA751877" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA751877 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8379440 8379440 PRJNA751877_P_NODE_12167_length_324_cov_2.760956_g12045_i0 PRJNA751877 12167 324 2.760956 8.94549744 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 374 5.719999999999998e-99   NTclustered gi|301014702|gb|GQ377715.1| 323453 g12045 i0 88.498 65.4814814814815 313 30 96 6 15 324 40 349 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 21216 374 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
13479974 13479974 PRJNA751877_P_NODE_13171_length_315_cov_1.272727_g13049_i0 PRJNA751877 13171 315 1.272727 4.00909005 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 307 5.7e-79   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g13049 i0 84.81 53.2761904761905 316 37 99 9 1 313 3701 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16782 307 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16029075 16029075 PRJNA751877_P_NODE_25253_length_247_cov_1.327586_g25131_i0 PRJNA751877 25253 247 1.327586 3.27913742 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 283 7.269999999999999e-72   NTclustered gi|300676716|gb|GQ377714.1| 323453 g25131 i0 88.017 69.8137651821862 242 25 98 3 1 242 280 43 Heteromita sp. PRA-74 rps22a (rps22a) mRNA, complete cds blastn 17244 283 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;