RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA751877" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA751877 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3752030 3752030 PRJNA751877_P_NODE_28983_length_242_cov_1.366864_g28861_i0 PRJNA751877 28983 242 1.366864 3.30781088 Nostocaceae 1162 Bacteria Bacteria 448 2.3799999999999995e-121   NTclustered gi|47118302|dbj|BA000019.2| 103690 g28861 i0 100 5.26446280991736 242 0 100 0 1 242 4275044 4274803 Nostoc sp. PCC 7120 DNA, complete genome blastn 1274 448 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. PCC 7120 = FACHB-418
13954248 13954248 PRJNA751877_P_NODE_27731_length_244_cov_0.900585_g27609_i0 PRJNA751877 27731 244 0.900585 2.1974274 Nostocales 1161 Bacteria Bacteria 390 4.11e-104   NTclustered gi|1373819911|dbj|AP018318.1| 196308 g27609 i0 95.492 50.2295081967213 244 11 100 0 1 244 2577285 2577042 Nostoc sp. HK-01 DNA, complete genome blastn 12256 390 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. HK-01
19051917 19051917 PRJNA751877_P_NODE_21935_length_252_cov_1.720670_g21813_i0 PRJNA751877 21935 252 1.72067 4.3360884 Nostocaceae 1162 Bacteria Bacteria 466 6.89e-127   NTclustered gi|47118302|dbj|BA000019.2| 103690 g21813 i0 100 5 252 0 100 0 1 252 4275074 4275325 Nostoc sp. PCC 7120 DNA, complete genome blastn 1260 466 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. PCC 7120 = FACHB-418

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;