contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA745553" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 724029 | 724029 | PRJNA745553_S_NODE_13301_length_337_cov_6.136364_g13106_i0 | PRJNA745553 | 13301 | 337 | 6.136364 | 20.67954668 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 257 | 6.28e-64 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g13106 | i0 | 85.887 | 218.06824925816 | 248 | 27 | 74 | 7 | 25 | 267 | 1010074 | 1009830 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 73489 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 724209 | 724209 | PRJNA745553_S_NODE_23781_length_253_cov_4.277778_g23586_i0 | PRJNA745553 | 23781 | 253 | 4.277778 | 10.82277834 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 196 | 1e-45 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g23586 | i0 | 85.561 | 1.47826086956522 | 187 | 27 | 74 | 0 | 55 | 241 | 1053 | 867 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 374 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 3275727 | 3275727 | PRJNA745553_S_NODE_6363_length_462_cov_9.347044_g6169_i0 | PRJNA745553 | 6363 | 462 | 9.347044 | 43.18334328 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 719 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g6169 | i0 | 94.816 | 173.525974025974 | 463 | 21 | 100 | 2 | 1 | 462 | 718 | 258 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 80169 | 719 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 4552843 | 4552843 | PRJNA745553_S_NODE_29804_length_213_cov_4.371429_g29609_i0 | PRJNA745553 | 29804 | 213 | 4.371429 | 9.31114377 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 335 | 1.6599999999999996e-87 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g29609 | i0 | 98.421 | 103.028169014085 | 190 | 3 | 89 | 0 | 13 | 202 | 2556235 | 2556424 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 21945 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 7103075 | 7103075 | PRJNA745553_S_NODE_5006_length_504_cov_3.069606_g4812_i0 | PRJNA745553 | 5006 | 504 | 3.069606 | 15.47081424 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 789 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g4812 | i0 | 95.893 | 63.8611111111111 | 487 | 20 | 97 | 0 | 18 | 504 | 3558048 | 3557562 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 32186 | 789 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 8377592 | 8377592 | PRJNA745553_S_NODE_24527_length_250_cov_1.740113_g24332_i0 | PRJNA745553 | 24527 | 250 | 1.740113 | 4.3502825 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 165 | 2.79e-36 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g24332 | i0 | 87.162 | 181.736 | 148 | 15 | 58 | 4 | 106 | 250 | 16951 | 17097 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 45434 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 10127273 | 10127273 | PRJNA745553_S_NODE_13248_length_338_cov_3.992453_g13053_i0 | PRJNA745553 | 13248 | 338 | 3.992453 | 13.49449114 | Prosthecobacter | 48463 | Bacteria | Bacteria | 466 | 9.62e-127 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g13053 | i0 | 94.684 | 218.207100591716 | 301 | 15 | 89 | 1 | 32 | 331 | 2841 | 2541 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 73754 | 466 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 10928016 | 10928016 | PRJNA745553_S_NODE_12449_length_348_cov_2.301818_g12254_i0 | PRJNA745553 | 12449 | 348 | 2.301818 | 8.01032664 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 577 | 4.3999999999999996e-160 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g12254 | i0 | 96.552 | 109.16091954023 | 348 | 12 | 100 | 0 | 1 | 348 | 244 | 591 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 37988 | 577 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 10928169 | 10928169 | PRJNA745553_S_NODE_20629_length_272_cov_3.894472_g20434_i0 | PRJNA745553 | 20629 | 272 | 3.894472 | 10.59296384 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 246 | 1.0699999999999999e-60 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g20434 | i0 | 84.585 | 110.566176470588 | 253 | 34 | 93 | 4 | 1 | 251 | 3450027 | 3450276 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 30074 | 246 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 10928260 | 10928260 | PRJNA745553_S_NODE_26669_length_241_cov_3.886905_g26474_i0 | PRJNA745553 | 26669 | 241 | 3.886905 | 9.36744105 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 241 | 4.310000000000001e-59 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g26474 | i0 | 86.667 | 51.5228215767635 | 225 | 20 | 91 | 9 | 16 | 235 | 15372 | 15591 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 12417 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 12203913 | 12203913 | PRJNA745553_S_NODE_7310_length_438_cov_5.542466_g7116_i0 | PRJNA745553 | 7310 | 438 | 5.542466 | 24.27600108 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 436 | 1e-117 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g7116 | i0 | 84.922 | 112.415525114155 | 451 | 46 | 100 | 20 | 1 | 438 | 1316781 | 1316340 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 49238 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13478080 | 13478080 | PRJNA745553_S_NODE_26351_length_242_cov_8.644970_g26156_i0 | PRJNA745553 | 26351 | 242 | 8.64497 | 20.9208274 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 171 | 5.77e-38 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g26156 | i0 | 81.567 | 16.3388429752066 | 217 | 30 | 88 | 9 | 17 | 228 | 454799 | 454588 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 3954 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 13478140 | 13478140 | PRJNA745553_S_NODE_2911_length_593_cov_2.880769_g2729_i0 | PRJNA745553 | 2911 | 593 | 2.880769 | 17.08296017 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 828 | 0 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g2729 | i0 | 92.561 | 207.214165261383 | 578 | 42 | 97 | 1 | 11 | 588 | 733 | 157 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 122878 | 828 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 17302171 | 17302171 | PRJNA745553_S_NODE_1474_length_706_cov_7.598736_g1334_i0 | PRJNA745553 | 1474 | 706 | 7.598736 | 53.64707616 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 1114 | 0 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g1334 | i0 | 96.847 | 263.712464589235 | 666 | 21 | 94 | 0 | 15 | 680 | 3412105 | 3412770 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 186181 | 1114 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 17302341 | 17302341 | PRJNA745553_S_NODE_25234_length_247_cov_2.465517_g25039_i0 | PRJNA745553 | 25234 | 247 | 2.465517 | 6.08982699 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 117 | 7.810000000000001e-22 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g25039 | i0 | 77.99 | 3.82591093117409 | 209 | 31 | 81 | 11 | 14 | 212 | 3919051 | 3918848 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 945 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18575771 | 18575771 | PRJNA745553_S_NODE_15275_length_315_cov_2.747934_g15080_i0 | PRJNA745553 | 15275 | 315 | 2.747934 | 8.6559921 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 440 | 5.389999999999997e-119 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g15080 | i0 | 93.023 | 187.073015873016 | 301 | 21 | 96 | 0 | 15 | 315 | 3411065 | 3411365 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 58928 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 18575781 | 18575781 | PRJNA745553_S_NODE_15935_length_309_cov_1.673729_g15740_i0 | PRJNA745553 | 15935 | 309 | 1.673729 | 5.17182261 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 254 | 7.37e-63 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g15740 | i0 | 84.706 | 0.825242718446602 | 255 | 37 | 82 | 2 | 4 | 257 | 1051951 | 1051698 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 255 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 18576086 | 18576086 | PRJNA745553_S_NODE_5555_length_486_cov_2.157385_g5361_i0 | PRJNA745553 | 5555 | 486 | 2.157385 | 10.4848911 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 523 | 8.349999999999998e-144 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g5361 | i0 | 86.583 | 240.600823045268 | 477 | 60 | 98 | 4 | 12 | 485 | 3116151 | 3115676 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 116932 | 523 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 19851044 | 19851044 | PRJNA745553_S_NODE_11396_length_363_cov_1.182759_g11201_i0 | PRJNA745553 | 11396 | 363 | 1.182759 | 4.29341517 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 621 | 2.09e-173 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g11201 | i0 | 99.415 | 99.7575757575758 | 342 | 2 | 94 | 0 | 13 | 354 | 3556863 | 3557204 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 36212 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 19851109 | 19851109 | PRJNA745553_S_NODE_15076_length_317_cov_4.061475_g14881_i0 | PRJNA745553 | 15076 | 317 | 4.061475 | 12.87487575 | uncultured Ruficoccus sp. | 2175960 | Bacteria | Bacteria | 159 | 1.7e-34 | NTclustered | gi|2907625921|emb|OZ223481.1| | 2175960 | g14881 | i0 | 77 | 137.145110410095 | 300 | 56 | 93 | 12 | 4 | 298 | 740577 | 740286 | MAG: uncultured Ruficoccus sp. isolate b2a3d85c-2e17-47e2-9e32-7ac6437316b9 genome assembly, chromosome: 10 | blastn | 43475 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | uncultured Ruficoccus sp. | |
| 22401738 | 22401738 | PRJNA745553_S_NODE_27498_length_236_cov_3.257669_g27303_i0 | PRJNA745553 | 27498 | 236 | 3.257669 | 7.68809884 | Actomonas aquatica | 2866162 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2647674565|gb|CP139781.1| | 2866162 | g27303 | i0 | 100 | 0.11864406779661 | 28 | 0 | 12 | 0 | 96 | 123 | 5984867 | 5984840 | Actomonas aquatica strain WL0086 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Actomonas | Actomonas aquatica | |
| 22401746 | 22401746 | PRJNA745553_S_NODE_28258_length_231_cov_2.518987_g28063_i0 | PRJNA745553 | 28258 | 231 | 2.518987 | 5.81885997 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 274 | 4.05e-69 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g28063 | i0 | 98.701 | 11.9480519480519 | 154 | 2 | 67 | 0 | 68 | 221 | 5626948 | 5627101 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 2760 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 23677193 | 23677193 | PRJNA745553_S_NODE_20899_length_270_cov_8.157360_g20704_i0 | PRJNA745553 | 20899 | 270 | 8.15736 | 22.024872 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 327 | 3.67e-85 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g20704 | i0 | 92.241 | 60.8740740740741 | 232 | 16 | 85 | 2 | 23 | 252 | 3833600 | 3833369 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 16436 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24950647 | 24950647 | PRJNA745553_S_NODE_17680_length_293_cov_5.636364_g17485_i0 | PRJNA745553 | 17680 | 293 | 5.636364 | 16.51454652 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 265 | 3.21e-66 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g17485 | i0 | 90.863 | 74.3276450511945 | 197 | 18 | 67 | 0 | 24 | 220 | 3411200 | 3411396 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 21778 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 24950766 | 24950766 | PRJNA745553_S_NODE_25200_length_247_cov_3.517241_g25005_i0 | PRJNA745553 | 25200 | 247 | 3.517241 | 8.68758527 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 324 | 4.2799999999999995e-84 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g25005 | i0 | 92.576 | 101.14979757085 | 229 | 11 | 91 | 6 | 1 | 225 | 28443 | 28669 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 24984 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;