RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA745553" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA745553 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724148 724148 PRJNA745553_S_NODE_1_length_6034_cov_133.659453_g0_i0 PRJNA745553 1 6034 133.659453 8065.01139402 Tobamovirus tabaci 3432891 Viruses Viruses 10960 0   NTclustered gi|388240125|emb|HE818410.1| 12242 g0 i0 99.733 98.8423931057342 5986 10 99 4 24 6003 1 5986 Tobacco mosaic virus isolate Chengjiang, complete genome blastn 596415 10960 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
2000393 2000393 PRJNA745553_S_NODE_2_length_5732_cov_122.378866_g0_i1 PRJNA745553 2 5732 122.378866 7014.75659912 Tobamovirus tabaci 3432891 Viruses Viruses 10218 0   NTclustered gi|388240125|emb|HE818410.1| 12242 g0 i1 99.802 97.0767620376832 5568 8 97 1 145 5709 5568 1 Tobacco mosaic virus isolate Chengjiang, complete genome blastn 556444 10218 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
5828061 5828061 PRJNA745553_S_NODE_7125_length_443_cov_6.227027_g6931_i0 PRJNA745553 7125 443 6.227027 27.58572961 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.012   NTclustered gi|1995060321|gb|MN450069.1| 12164 g6931 i0 100 0.0654627539503386 29 0 7 0 1 29 15 43 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8377657 8377657 PRJNA745553_S_NODE_28027_length_232_cov_5.761006_g27832_i0 PRJNA745553 28027 232 5.761006 13.36553392 Tobamovirus tabaci 3432891 Viruses Viruses 346 8.5e-91   NTclustered gi|388240313|emb|HE818457.1| 12242 g27832 i0 97.537 87.5905172413793 203 3 87 1 21 221 5349 5551 Tobacco mosaic virus isolate Yongren-1, complete genome blastn 20321 346 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
9652771 9652771 PRJNA745553_S_NODE_29228_length_222_cov_5.080537_g29033_i0 PRJNA745553 29228 222 5.080537 11.27879214 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g29033 i0 100 0.135135135135135 30 0 14 0 1 30 8 37 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
12203563 12203563 PRJNA745553_S_NODE_15990_length_308_cov_6.753191_g15795_i0 PRJNA745553 15990 308 6.753191 20.79982828 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.029   NTclustered gi|1995060321|gb|MN450069.1| 12164 g15795 i0 100 0.0909090909090909 28 0 9 0 281 308 43 16 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12203775 12203775 PRJNA745553_S_NODE_27890_length_233_cov_5.081250_g27695_i0 PRJNA745553 27890 233 5.08125 11.8393125 Tobamovirus tabaci 3432891 Viruses Viruses 327 3.09e-85   NTclustered gi|388240313|emb|HE818457.1| 12242 g27695 i0 96.939 84.0515021459227 196 5 84 1 18 212 5567 5372 Tobacco mosaic virus isolate Yongren-1, complete genome blastn 19584 327 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
13477887 13477887 PRJNA745553_S_NODE_14851_length_319_cov_7.581301_g14656_i0 PRJNA745553 14851 319 7.581301 24.18435019 Tobamovirus tabaci 3432891 Viruses Viruses 527 4.079999999999998e-145   NTclustered gi|388240245|emb|HE818440.1| 12242 g14656 i0 98.658 93.6677115987461 298 3 93 1 1 297 1172 875 Tobacco mosaic virus isolate Shaoxing, complete genome blastn 29880 527 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
13477978 13477978 PRJNA745553_S_NODE_20131_length_275_cov_6.059406_g19936_i0 PRJNA745553 20131 275 6.059406 16.6633665 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.025   NTclustered gi|1995060321|gb|MN450069.1| 12164 g19936 i0 100 0.101818181818182 28 0 10 0 1 28 16 43 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13478005 13478005 PRJNA745553_S_NODE_21711_length_265_cov_5.713542_g21516_i0 PRJNA745553 21711 265 5.713542 15.1408863 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g21516 i0 100 0.109433962264151 29 0 11 0 237 265 43 15 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19851340 19851340 PRJNA745553_S_NODE_28496_length_229_cov_3.788462_g28301_i0 PRJNA745553 28496 229 3.788462 8.67557798 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.02   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g28301 i0 100 0.122270742358079 28 0 12 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22401530 22401530 PRJNA745553_S_NODE_15378_length_314_cov_3.360996_g15183_i0 PRJNA745553 15378 314 3.360996 10.55352744 Tobamovirus tabaci 3432891 Viruses Viruses 540 5.139999999999999e-149   NTclustered gi|1339936524|gb|MG516107.1| 12242 g15183 i0 98.371 97.4872611464968 307 5 98 0 1 307 6354 6048 Tobacco mosaic virus isolate Shenyang, complete genome blastn 30611 540 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;