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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA745553" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1198639 1198639 PRJNA745553_S_NODE_26121_length_243_cov_4.835294_g25926_i0 PRJNA745553 26121 243 4.835294 11.74976442 root 1 Root_unresolved Root_unresolved 431 2.4099999999999995e-116   NTclustered gi|909719646|gb|KT185626.1| 5755 g25926 i0 99.578 41.0617283950617 237 0 97 1 8 243 3666 3902 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9978 431 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2000187 2000187 PRJNA745553_S_NODE_18782_length_285_cov_2.179245_g18587_i0 PRJNA745553 18782 285 2.179245 6.21084825 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 315 3.039999999999999e-81   NTclustered gi|470439346|ref|XM_004339129.1| 1257118 g18587 i0 95 0.701754385964912 200 10 70 0 64 263 858 659 Acanthamoeba castellanii str. Neff methyltransferase domain containing protein (ACA1_058200), partial mRNA blastn 200 315 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2000260 2000260 PRJNA745553_S_NODE_22962_length_258_cov_2.243243_g22767_i0 PRJNA745553 22962 258 2.243243 5.78756694 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 298 2.73e-76   NTclustered gi|300078498|gb|GU001160.1| 5755 g22767 i0 92.237 0.848837209302326 219 4 80 4 31 237 5927 5710 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 219 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3275368 3275368 PRJNA745553_S_NODE_123_length_1394_cov_22.247540_g100_i0 PRJNA745553 123 1394 22.24754 310.1307076 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 95.3 2.34e-14   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g100 i0 87.805 12.6929698708752 82 8 6 1 766 845 14238 14319 Paramoeba aparasomata mitochondrion, complete genome blastn 17694 95.3 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
9652628 9652628 PRJNA745553_S_NODE_20668_length_272_cov_2.271357_g20473_i0 PRJNA745553 20668 272 2.271357 6.17809104 Korotnevella stella 218663 Discosea other_Eukaryota 440 4.559999999999998e-119   NTclustered gi|56548964|gb|AY686573.1| 218663 g20473 i0 98.039 87.3051470588235 255 1 92 2 1 251 1107 853 Korotnevella stella small subunit ribosomal RNA gene, partial sequence blastn 23747 440 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella stella
14753024 14753024 PRJNA745553_S_NODE_17712_length_293_cov_3.854545_g17517_i0 PRJNA745553 17712 293 3.854545 11.29381685 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 403 6.51e-108   NTclustered gi|399764262|gb|JQ271773.1| 1105345 g17517 i0 92.908 35.122866894198 282 13 95 6 1 277 925 646 Vexillifera bacillipedes strain P20Z 18S ribosomal RNA gene, partial sequence blastn 10291 403 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
14753089 14753089 PRJNA745553_S_NODE_21652_length_266_cov_1.590674_g21457_i0 PRJNA745553 21652 266 1.590674 4.23119284 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 196 1.06e-45   NTclustered gi|470449263|ref|XM_004340206.1| 1257118 g21457 i0 92.701 0.759398496240602 137 9 51 1 14 149 1049 1185 Acanthamoeba castellanii str. Neff Omethyltransferase domain containing protein (ACA1_369770), partial mRNA blastn 202 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302104 17302104 PRJNA745553_S_NODE_11834_length_356_cov_5.045936_g11639_i0 PRJNA745553 11834 356 5.045936 17.96353216 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 348 3.84e-91   NTclustered gi|300078498|gb|GU001160.1| 5755 g11639 i0 93.59 14.2837078651685 234 13 79 2 1 232 6092 6325 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5085 348 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302229 17302229 PRJNA745553_S_NODE_18054_length_290_cov_7.400922_g17859_i0 PRJNA745553 18054 290 7.4009219999999996 21.4626738 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 444 3.79e-120   NTclustered gi|300078498|gb|GU001160.1| 5755 g17859 i0 95.374 26.3551724137931 281 10 97 3 1 280 6745 7023 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7643 444 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302230 17302230 PRJNA745553_S_NODE_18074_length_290_cov_4.617512_g17879_i0 PRJNA745553 18074 290 4.617512 13.3907848 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 473 4.8399999999999986e-129   NTclustered gi|470457259|ref|XM_004341073.1| 1257118 g17879 i0 97.473 0.955172413793103 277 7 96 0 5 281 2335 2059 Acanthamoeba castellanii str. Neff DNA-directed DNA polymerase (ACA1_236150), partial mRNA blastn 277 473 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21126786 21126786 PRJNA745553_S_NODE_2197_length_639_cov_3.068905_g2023_i0 PRJNA745553 2197 639 3.068905 19.61030295 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 676 0   NTclustered gi|470387059|ref|XM_004334206.1| 1257118 g2023 i0 95.139 0.676056338028169 432 15 67 1 126 551 438 7 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_026980), partial mRNA blastn 432 676 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22401583 22401583 PRJNA745553_S_NODE_18458_length_287_cov_4.228972_g18263_i0 PRJNA745553 18458 287 4.228972 12.13714964 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 254 6.78e-63   NTclustered gi|470520632|ref|XM_004353570.1| 1257118 g18263 i0 89.163 0.707317073170732 203 22 71 0 73 275 482 280 Acanthamoeba castellanii str. Neff putative peptidoglycan binding domain containing protein (ACA1_152930), partial mRNA blastn 203 254 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23677253 23677253 PRJNA745553_S_NODE_24399_length_250_cov_7.271186_g24204_i0 PRJNA745553 24399 250 7.271186 18.177965 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 396 9.079999999999996e-106   NTclustered gi|62865939|gb|AY929914.1| 325077 g24204 i0 98.238 91.56 227 3 90 1 25 250 1403 1629 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22890 396 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
24150258 24150258 PRJNA745553_S_NODE_16979_length_299_cov_20.061947_g16784_i0 PRJNA745553 16979 299 20.061947 59.98522153 Comandonia 158895 Discosea other_Eukaryota 420 6.62e-113   NTclustered gi|18031725|gb|AY033896.1| 158896 g16784 i0 97.561 73.6989966555184 246 4 82 2 36 279 946 701 Comandonia operculata small subunit ribosomal RNA gene, complete sequence blastn 22036 424 0.990566037735849 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Comandonia Comandonia operculata
24950551 24950551 PRJNA745553_S_NODE_12240_length_350_cov_27.754513_g12045_i0 PRJNA745553 12240 350 27.754513 97.1407955 Acanthamoeba sp. KA/MSG1 215563 Discosea other_Eukaryota 479 1.2799999999999996e-130   NTclustered gi|27085434|gb|AY173002.1| 215563 g12045 i0 99.245 75.7485714285714 265 2 76 0 1 265 700 964 Acanthamoeba sp. KA/MSG1 18S ribosomal RNA gene, complete sequence blastn 26512 479 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp. KA/MSG1
24950992 24950992 PRJNA745553_S_NODE_8880_length_404_cov_14.734139_g8685_i0 PRJNA745553 8880 404 14.734139 59.52592156 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 510 5.32e-140   NTclustered gi|300078498|gb|GU001160.1| 5755 g8685 i0 89.524 30.7227722772277 420 21 100 16 1 404 6482 6070 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12412 510 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;