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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA745553" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA745553 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724230 724230 PRJNA745553_S_NODE_24901_length_248_cov_6.005714_g24706_i0 PRJNA745553 24901 248 6.005714 14.89417072 Methanothrix sp. 90426 Archaea Archaea 379 9.059999999999998e-101   NTclustered gi|2626216449|emb|OY821645.1| 90426 g24706 i0 98.605 33.4475806451613 215 1 86 2 14 227 826919 827132 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 8295 379 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
9652774 9652774 PRJNA745553_S_NODE_29348_length_220_cov_6.680272_g29153_i0 PRJNA745553 29348 220 6.680272 14.6965984 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 346 7.980000000000001e-91   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g29153 i0 99.474 40.7 190 1 86 0 20 209 1502698 1502887 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 8954 346 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
11402331 11402331 PRJNA745553_S_NODE_10449_length_375_cov_499.052980_g10254_i0 PRJNA745553 10449 375 499.05298 1871.448675 root 1 Root_unresolved Root_unresolved 654 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g10254 i0 98.133 262.149333333333 375 7 100 0 1 375 3116100 3115726 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 98306 654 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
16026875 16026875 PRJNA745553_S_NODE_26193_length_243_cov_2.264706_g25998_i0 PRJNA745553 26193 243 2.264706 5.50323558 Methanothrix sp. 90426 Archaea Archaea 252 2.01e-62   NTclustered gi|2626216449|emb|OY821645.1| 90426 g25998 i0 99.281 64.8230452674897 139 1 57 0 80 218 827246 827108 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 15752 252 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
18575703 18575703 PRJNA745553_S_NODE_11135_length_366_cov_3.928328_g10940_i0 PRJNA745553 11135 366 3.928328 14.37768048 Methanobrevibacter olleyae 294671 Archaea Archaea 379 1.3999999999999995e-100   NTclustered gi|998157363|gb|CP014265.1| 294671 g10940 i0 90.068 12.8770491803279 292 29 80 0 10 301 272201 272492 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 4713 379 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
19851190 19851190 PRJNA745553_S_NODE_19596_length_279_cov_5.417476_g19401_i0 PRJNA745553 19596 279 5.417476 15.11475804 Methanobrevibacter smithii 2173 Archaea Archaea 281 3.01e-71   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g19401 i0 87.603 7.66666666666667 242 30 87 0 28 269 1003493 1003252 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 2139 281 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
21600891 21600891 PRJNA745553_S_NODE_29617_length_215_cov_1863.718310_g29422_i0 PRJNA745553 29617 215 1863.71831 4006.9943665 root 1 Root_unresolved Root_unresolved 370 4.609999999999999e-98   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g29422 i0 97.674 247.804651162791 215 5 100 0 1 215 3115886 3116100 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 53278 370 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;