RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA745553" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA745553 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724230 724230 PRJNA745553_S_NODE_24901_length_248_cov_6.005714_g24706_i0 PRJNA745553 24901 248 6.005714 14.89417072 Methanothrix sp. 90426 Archaea Archaea 379 9.059999999999998e-101   NTclustered gi|2626216449|emb|OY821645.1| 90426 g24706 i0 98.605 33.4475806451613 215 1 86 2 14 227 826919 827132 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 8295 379 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
11402331 11402331 PRJNA745553_S_NODE_10449_length_375_cov_499.052980_g10254_i0 PRJNA745553 10449 375 499.05298 1871.448675 root 1 Root_unresolved Root_unresolved 654 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g10254 i0 98.133 262.149333333333 375 7 100 0 1 375 3116100 3115726 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 98306 654 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
16026875 16026875 PRJNA745553_S_NODE_26193_length_243_cov_2.264706_g25998_i0 PRJNA745553 26193 243 2.264706 5.50323558 Methanothrix sp. 90426 Archaea Archaea 252 2.01e-62   NTclustered gi|2626216449|emb|OY821645.1| 90426 g25998 i0 99.281 64.8230452674897 139 1 57 0 80 218 827246 827108 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 15752 252 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
21600891 21600891 PRJNA745553_S_NODE_29617_length_215_cov_1863.718310_g29422_i0 PRJNA745553 29617 215 1863.71831 4006.9943665 root 1 Root_unresolved Root_unresolved 370 4.609999999999999e-98   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g29422 i0 97.674 247.804651162791 215 5 100 0 1 215 3115886 3116100 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 53278 370 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;