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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA744060" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
722825 722825 PRJNA744060_P_NODE_101_length_2592_cov_31.538706_g75_i0 PRJNA744060 101 2592 31.538706 817.48325952 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 1646 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g75 i0 78.614 92.1354166666667 2539 505 97 32 30 2549 1 2520 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 238815 1646 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
722897 722897 PRJNA744060_P_NODE_1341_length_1226_cov_7.948829_g1178_i0 PRJNA744060 1341 1226 7.948829 97.45264354 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 592 5.97e-164   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g1178 i0 77.778 38.7194127243067 999 196 80 18 244 1226 1546 558 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 47470 592 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1999140 1999140 PRJNA744060_P_NODE_23002_length_338_cov_2.332075_g22673_i0 PRJNA744060 23002 338 2.332075 7.8824135 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 241 6.340000000000001e-59   NTclustered gi|470383613|ref|XM_004333927.1| 1257118 g22673 i0 83.206 7.07692307692308 262 44 78 0 4 265 323 62 Acanthamoeba castellanii str. Neff extracellular response kinase, putative (ACA1_400280), partial mRNA blastn 2392 241 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1999663 1999663 PRJNA744060_P_NODE_5602_length_667_cov_7.523569_g5288_i0 PRJNA744060 5602 667 7.523569 50.18220523 Platyamoeba placida 3454475 Discosea other_Eukaryota 708 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g5288 i0 85.907 99.7556221889055 667 90 99 4 2 666 350 1014 Platyamoeba placida actin mRNA, partial cds blastn 66537 708 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
3274403 3274403 PRJNA744060_P_NODE_19923_length_362_cov_1.598616_g19594_i0 PRJNA744060 19923 362 1.598616 5.78698992 Ripella decalvata 2047822 Discosea other_Eukaryota 556 5.97e-154   NTclustered gi|1269228424|gb|MF683549.1| 2047822 g19594 i0 94.505 100.030386740331 364 14 99 6 1 361 988 628 Ripella decalvata clone 26.2.3 18S ribosomal RNA gene, partial sequence blastn 36211 556 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
3275008 3275008 PRJNA744060_P_NODE_5623_length_666_cov_5.829680_g5309_i0 PRJNA744060 5623 666 5.82968 38.8256688 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 569 1.4799999999999994e-157   NTclustered gi|470447963|ref|XM_004340066.1| 1257118 g5309 i0 83.721 87.8048048048048 602 98 90 0 3 604 1018 1619 Acanthamoeba castellanii str. Neff ATP synthase, putative (ACA1_367940), partial mRNA blastn 58478 569 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4552107 4552107 PRJNA744060_P_NODE_51524_length_242_cov_0.881657_g51195_i0 PRJNA744060 51524 242 0.881657 2.13360994 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 448 2.3799999999999995e-121   NTclustered gi|507411|gb|U07415.1|APU07415 5757 g51195 i0 100 101.214876033058 242 0 100 0 1 242 691 932 Acanthamoeba polyphaga JAC/S2 ATCC 50372 18S rRNA gene blastn 24494 448 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
5827064 5827064 PRJNA744060_P_NODE_44785_length_251_cov_3.488764_g44456_i0 PRJNA744060 44785 251 3.488764 8.75679764 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 213 9.86e-51   NTclustered gi|470524163|ref|XM_004356394.1| 1257118 g44456 i0 82.716 70.9203187250996 243 38 96 4 1 241 912 1152 Acanthamoeba castellanii str. Neff VATPase subunit A, putative (ACA1_171100), partial mRNA blastn 17801 213 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7101899 7101899 PRJNA744060_P_NODE_2666_length_940_cov_4.628604_g2420_i0 PRJNA744060 2666 940 4.628604 43.5088776 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 601 7.53e-167   NTclustered gi|470450828|ref|XM_004340382.1| 1257118 g2420 i0 80.402 65.0755319148936 796 150 84 5 147 939 921 129 Acanthamoeba castellanii str. Neff elongation factor 1alpha, somatic form, putative (ACA1_138040), partial mRNA blastn 61171 601 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7102198 7102198 PRJNA744060_P_NODE_43866_length_253_cov_0.866667_g43537_i0 PRJNA744060 43866 253 0.866667 2.19266751 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 412 9.14e-111   NTclustered gi|470490977|ref|XM_004345789.1| 1257118 g43537 i0 96.078 1.00790513833992 255 7 99 1 2 253 559 305 Acanthamoeba castellanii str. Neff autophagy protein, putative (ACA1_181960), partial mRNA blastn 255 412 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8376392 8376392 PRJNA744060_P_NODE_19967_length_361_cov_5.118056_g19638_i0 PRJNA744060 19967 361 5.118056 18.47618216 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 529 1.2999999999999996e-145   NTclustered gi|300078498|gb|GU001160.1| 5755 g19638 i0 93.207 17.2049861495845 368 12 100 10 1 361 5810 5449 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6211 529 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8376981 8376981 PRJNA744060_P_NODE_54487_length_225_cov_4.440789_g54158_i0 PRJNA744060 54487 225 4.440789 9.99177525 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 121 5.409999999999999e-23   NTclustered gi|470515959|ref|XM_004352951.1| 1257118 g54158 i0 79.33 4.07555555555556 179 32 79 3 48 225 1772 1598 Acanthamoeba castellanii str. Neff calciumtranslocating P-type ATPase, PMCA-type, putative (ACA1_070960), partial mRNA blastn 917 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9651447 9651447 PRJNA744060_P_NODE_15168_length_412_cov_3.156342_g14839_i0 PRJNA744060 15168 412 3.156342 13.00412904 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 4.7700000000000003e-51   NTclustered gi|470508830|ref|XM_004349586.1| 1257118 g14839 i0 76.5 13.7135922330097 400 90 97 4 1 398 908 1305 Acanthamoeba castellanii str. Neff pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (ACA1_142390), partial mRNA blastn 5650 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13477047 13477047 PRJNA744060_P_NODE_2911_length_904_cov_4.493381_g2656_i0 PRJNA744060 2911 904 4.493381 40.62016424 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 435 7.76e-117   NTclustered gi|470439813|ref|XM_004339184.1| 1257118 g2656 i0 77.824 65.5785398230089 726 145 79 11 1 718 958 1675 Acanthamoeba castellanii str. Neff chaperone protein DnaK, putative (ACA1_058850), partial mRNA blastn 59283 435 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13477415 13477415 PRJNA744060_P_NODE_50311_length_243_cov_1.688235_g49982_i0 PRJNA744060 50311 243 1.688235 4.10241105 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 178 3.4599999999999993e-40   NTclustered gi|470505078|ref|XM_004348480.1| 1257118 g49982 i0 80.519 16.2880658436214 231 45 95 0 13 243 2453 2223 Acanthamoeba castellanii str. Neff DNAdirected RNA polymerase, beta subunit (ACA1_158460), partial mRNA blastn 3958 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13477514 13477514 PRJNA744060_P_NODE_6991_length_602_cov_3.034026_g6668_i0 PRJNA744060 6991 602 3.034026 18.26483652 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 357 1.13e-93   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g6668 i0 79.159 9.76910299003322 523 103 86 6 83 602 798 279 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 5881 357 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16025748 16025748 PRJNA744060_P_NODE_233_length_2033_cov_8.567347_g186_i0 PRJNA744060 233 2033 8.567347 174.17416451 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 966 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g186 i0 75.969 59.9926217412691 1960 424 95 36 99 2033 1 1938 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 121965 966 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16026198 16026198 PRJNA744060_P_NODE_49893_length_244_cov_0.912281_g49564_i0 PRJNA744060 49893 244 0.912281 2.22596564 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 342 1.17e-89   NTclustered gi|470481330|ref|XM_004342516.1| 1257118 g49564 i0 92.623 1 244 9 100 1 1 244 220 454 Acanthamoeba castellanii str. Neff RhoGAP domain containing protein (ACA1_186680), partial mRNA blastn 244 342 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17301004 17301004 PRJNA744060_P_NODE_12454_length_454_cov_3.792651_g12126_i0 PRJNA744060 12454 454 3.792651 17.21863554 Platyamoeba placida 3454475 Discosea other_Eukaryota 597 4.5099999999999986e-166   NTclustered gi|33946348|gb|AY294153.1| 197527 g12126 i0 90.487 98.273127753304 452 43 99 0 1 452 620 1071 Platyamoeba placida actin mRNA, partial cds blastn 44616 597 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
17776267 17776267 PRJNA744060_P_NODE_51554_length_241_cov_4.250000_g51225_i0 PRJNA744060 51554 241 4.25 10.2425 Acanthamoeba 5754 Discosea other_Eukaryota 446 8.519999999999999e-121   NTclustered gi|1497462138|gb|MG945010.1| 5755 g51225 i0 100 100 241 0 100 0 1 241 481 241 Acanthamoeba castellanii isolate PRZT013 18S ribosomal RNA gene, partial sequence blastn 24100 446 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18574693 18574693 PRJNA744060_P_NODE_14535_length_421_cov_3.548851_g14206_i0 PRJNA744060 14535 421 3.548851 14.94066271 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 178 6.41e-40   NTclustered gi|470504026|ref|XM_004348289.1| 1257118 g14206 i0 78.082 1.79809976247031 292 56 69 7 1 290 1088 1373 Acanthamoeba castellanii str. Neff H(+)-transporting atpase family protein (ACA1_022710), partial mRNA blastn 757 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22876030 22876030 PRJNA744060_P_NODE_44658_length_252_cov_0.871508_g44329_i0 PRJNA744060 44658 252 0.871508 2.19620016 Ripella 1217112 Discosea other_Eukaryota 405 1.52e-108   NTclustered gi|1269228376|gb|MF683501.1| 2047821 g44329 i0 95.652 88.3214285714286 253 10 100 1 1 252 475 727 Ripella platypodia clone 26.9.33 18S ribosomal RNA gene, partial sequence blastn 22257 405 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
24949352 24949352 PRJNA744060_P_NODE_10520_length_493_cov_13.047619_g10192_i0 PRJNA744060 10520 493 13.047619 64.32476167 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 1.61e-51   NTclustered gi|470490984|ref|XM_004345790.1| 1257118 g10192 i0 81.783 12.1967545638945 258 47 52 0 67 324 1 258 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_181970), partial mRNA blastn 6013 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24949671 24949671 PRJNA744060_P_NODE_2440_length_977_cov_6.167035_g2204_i0 PRJNA744060 2440 977 6.167035 60.25193195 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 392 5.1299999999999996e-104   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g2204 i0 81.25 42.5127942681679 496 83 50 7 490 977 1508 1015 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 41535 392 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24950164 24950164 PRJNA744060_P_NODE_54540_length_223_cov_7.533333_g54211_i0 PRJNA744060 54540 223 7.533333 16.79933259 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 259 1.09e-64   NTclustered gi|33946346|gb|AY294152.1| 242541 g54211 i0 89.32 85.2556053811659 206 22 92 0 18 223 39 244 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 19012 259 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;