contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA744060" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 723066 | 723066 | PRJNA744060_P_NODE_21361_length_350_cov_1.819495_g21032_i0 | PRJNA744060 | 21361 | 350 | 1.819495 | 6.3682325 | Thalassoporum mexicanum | 3457544 | Bacteria | Bacteria | 58.4 | 7.11e-4 | NTclustered | gi|427988066|gb|CP003592.1| | 82654 | g21032 | i0 | 94.595 | 0.517142857142857 | 37 | 2 | 11 | 0 | 217 | 253 | 253897 | 253933 | Pseudanabaena sp. PCC 7367, complete genome | blastn | 181 | 58.4 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Thalassoporaceae | Thalassoporum | Thalassoporum mexicanum | |
| 8376858 | 8376858 | PRJNA744060_P_NODE_46527_length_249_cov_0.886364_g46198_i0 | PRJNA744060 | 46527 | 249 | 0.886364 | 2.20704636 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 388 | 1.51e-103 | NTclustered | gi|225696187|gb|FJ805854.1| | 259957 | g46198 | i0 | 94.779 | 185.887550200803 | 249 | 13 | 100 | 0 | 1 | 249 | 1873 | 1625 | Uncultured Chroococcidiopsis sp. clone AR2_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 46286 | 388 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 13476884 | 13476884 | PRJNA744060_P_NODE_20051_length_361_cov_1.312500_g19722_i0 | PRJNA744060 | 20051 | 361 | 1.3125 | 4.738125 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 569 | 7.639999999999997e-158 | NTclustered | gi|453199515|gb|JQ997495.1| | 259957 | g19722 | i0 | 95.068 | 124.975069252078 | 365 | 13 | 99 | 3 | 1 | 360 | 86 | 450 | Uncultured Chroococcidiopsis sp. clone GKJWQY101AIMXN 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 45116 | 569 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 16501496 | 16501496 | PRJNA744060_P_NODE_9813_length_512_cov_1.902050_g9486_i0 | PRJNA744060 | 9813 | 512 | 1.90205 | 9.738496 | Bacteria | 2 | Bacteria | Bacteria | 553 | 1.1299999999999995e-152 | NTclustered | gi|184189902|gb|EU641380.1| | 1211 | g9486 | i0 | 86.497 | 102.603515625 | 511 | 59 | 98 | 8 | 1 | 504 | 838 | 331 | Uncultured cyanobacterium clone LW9m-1-74 16S ribosomal RNA gene, partial sequence | blastn | 52533 | 553 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 17301745 | 17301745 | PRJNA744060_P_NODE_53774_length_230_cov_2.171975_g53445_i0 | PRJNA744060 | 53774 | 230 | 2.171975 | 4.9955425 | Halomicronema hongdechloris | 1209493 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1562104929|gb|CP021983.2| | 1641165 | g53445 | i0 | 100 | 0.121739130434783 | 28 | 0 | 12 | 0 | 68 | 95 | 4905534 | 4905507 | Halomicronema hongdechloris C2206 genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Halomicronema | Halomicronema hongdechloris |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;