contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA744060" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 722875 | 722875 | PRJNA744060_P_NODE_12121_length_460_cov_3.113695_g11793_i0 | PRJNA744060 | 12121 | 460 | 3.113695 | 14.322997 | Paramecium tetraurelia | 5888 | SAR_Eukaryotes | SAR_Eukaryotes | 327 | 6.62e-85 | NTclustered | gi|145526872|ref|XM_001449205.1| | 5888 | g11793 | i0 | 80.516 | 7.76521739130435 | 426 | 83 | 93 | 0 | 2 | 427 | 121 | 546 | Paramecium tetraurelia uncharacterized protein (GSPATT00016658001), partial mRNA | blastn | 3572 | 327 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium tetraurelia | ||
| 6302509 | 6302509 | PRJNA744060_P_NODE_10805_length_487_cov_12.898551_g10477_i0 | PRJNA744060 | 10805 | 487 | 12.898551 | 62.81594337 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 453 | 1.11e-122 | NTclustered | gi|161787|gb|M87304.1|TETHIS31A | 5911 | g10477 | i0 | 86.506 | 78.7556468172485 | 415 | 52 | 85 | 4 | 34 | 446 | 583 | 171 | Tetrahymena thermophila histone H3 (HHT1) gene, complete cds | blastn | 38354 | 453 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 6302533 | 6302533 | PRJNA744060_P_NODE_28145_length_307_cov_3.294872_g27816_i0 | PRJNA744060 | 28145 | 307 | 3.294872 | 10.11525704 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 217 | 9.6e-52 | NTclustered | gi|10805|emb|X52242.1| | 5911 | g27816 | i0 | 84.305 | 13.0456026058632 | 223 | 33 | 72 | 2 | 79 | 300 | 30 | 251 | T.thermophila mRNA for calmodulin | blastn | 4005 | 217 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 7101710 | 7101710 | PRJNA744060_P_NODE_17166_length_388_cov_3.647619_g16837_i0 | PRJNA744060 | 17166 | 388 | 3.647619 | 14.15276172 | Stylonychia lemnae | 5949 | SAR_Eukaryotes | SAR_Eukaryotes | 324 | 7.11e-84 | NTclustered | gi|161194|gb|M76407.1|SLECALMODU | 5949 | g16837 | i0 | 83.099 | 12.9355670103093 | 355 | 60 | 91 | 0 | 34 | 388 | 608 | 254 | Stylonychia lemnae calmodulin gene, complete cds | blastn | 5019 | 324 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Stylonychia | Stylonychia lemnae | ||
| 7576449 | 7576449 | PRJNA744060_P_NODE_6986_length_602_cov_7.948960_g6663_i0 | PRJNA744060 | 6986 | 602 | 7.94896 | 47.8527392 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 699 | 0 | NTclustered | gi|10790|emb|X12767.1| | 5908 | g6663 | i0 | 91.228 | 77.0664451827243 | 513 | 45 | 85 | 0 | 90 | 602 | 1640 | 1128 | Tetrahymena pyriformis alpha-tubulin gene | blastn | 46394 | 699 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 14752488 | 14752488 | PRJNA744060_P_NODE_4912_length_712_cov_1.640063_g4611_i0 | PRJNA744060 | 4912 | 712 | 1.640063 | 11.67724856 | Isotricha intestinalis | 47897 | SAR_Eukaryotes | SAR_Eukaryotes | 529 | 2.6999999999999993e-145 | NTclustered | gi|92790151|emb|AJ965261.1| | 47897 | g4611 | i0 | 89.227 | 169.491573033708 | 427 | 41 | 60 | 5 | 287 | 712 | 670 | 248 | Isotricha intestinalis partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) | blastn | 120678 | 529 | 1 | Eukaryota | Sar | Ciliophora | Litostomatea | Vestibuliferida | Isotrichidae | Isotricha | Isotricha intestinalis | ||
| 16026149 | 16026149 | PRJNA744060_P_NODE_4693_length_728_cov_18.555725_g4393_i0 | PRJNA744060 | 4693 | 728 | 18.555725 | 135.085678 | Tetrahymena pyriformis | 5908 | SAR_Eukaryotes | SAR_Eukaryotes | 610 | 9.59e-170 | NTclustered | gi|10782|emb|X54004.1| | 5908 | g4393 | i0 | 82.321 | 60.853021978022 | 741 | 96 | 100 | 29 | 1 | 728 | 2179 | 1461 | Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA | blastn | 44301 | 610 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 16026348 | 16026348 | PRJNA744060_P_NODE_7873_length_567_cov_14.882591_g7549_i0 | PRJNA744060 | 7873 | 567 | 14.882591 | 84.38429097 | Moneuplotes crassus | 5936 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 2.39e-60 | NTclustered | gi|2149885|gb|U93852.1|ECU93852 | 5936 | g7549 | i0 | 83.032 | 48.3615520282187 | 277 | 42 | 49 | 4 | 156 | 430 | 1148 | 875 | Euplotes crassus histone H2B (H2B(1)) gene, complete cds | blastn | 27421 | 246 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Euplotida | Euplotidae | Moneuplotes | Moneuplotes crassus | ||
| 16026351 | 16026351 | PRJNA744060_P_NODE_7953_length_564_cov_11.572301_g7628_i0 | PRJNA744060 | 7953 | 564 | 11.572301 | 65.26777764 | Tetrahymena pyriformis | 5908 | SAR_Eukaryotes | SAR_Eukaryotes | 483 | 1.66e-131 | NTclustered | gi|217404|dbj|D10521.1|TETCALW | 5908 | g7628 | i0 | 86 | 75.5478723404255 | 450 | 63 | 80 | 0 | 83 | 532 | 473 | 24 | Tetrahymena pyriformis mRNA for calmodulin, complete cds | blastn | 42609 | 483 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 19050243 | 19050243 | PRJNA744060_P_NODE_35835_length_276_cov_1.758621_g35506_i0 | PRJNA744060 | 35835 | 276 | 1.758621 | 4.85379396 | Oxytrichidae | 57506 | SAR_Eukaryotes | SAR_Eukaryotes | 176 | 1.44e-39 | NTclustered | gi|331686220|gb|HQ432924.1| | 94289 | g35506 | i0 | 80.687 | 33.768115942029 | 233 | 39 | 83 | 6 | 4 | 233 | 859 | 630 | Sterkiella histriomuscorum strain 310 heat shock protein 70 (hsp70) gene, complete cds; macronuclear | blastn | 9320 | 176 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Sterkiella | Sterkiella histriomuscorum | ||
| 21125480 | 21125480 | PRJNA744060_P_NODE_1257_length_1255_cov_5.934856_g1101_i0 | PRJNA744060 | 1257 | 1255 | 5.934856 | 74.4824428 | Tetrahymena pyriformis | 5908 | SAR_Eukaryotes | SAR_Eukaryotes | 708 | 0 | NTclustered | gi|9837417|gb|AF287229.1| | 5908 | g1101 | i0 | 78.745 | 66.4454183266932 | 1068 | 219 | 85 | 8 | 149 | 1212 | 2005 | 942 | Tetrahymena pyriformis heat shock protein 90 (HSP81) gene, partial cds | blastn | 83389 | 708 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 21125835 | 21125835 | PRJNA744060_P_NODE_29777_length_299_cov_4.230088_g29448_i0 | PRJNA744060 | 29777 | 299 | 4.230088 | 12.64796312 | uncultured ciliate | 187299 | SAR_Eukaryotes | SAR_Eukaryotes | 536 | 6.3e-148 | NTclustered | gi|213058599|gb|FJ410756.1| | 187299 | g29448 | i0 | 98.997 | 101.130434782609 | 299 | 3 | 100 | 0 | 1 | 299 | 20 | 318 | Uncultured ciliate clone EBA41.23 18S ribosomal RNA gene, partial sequence | blastn | 30238 | 536 | 1 | Eukaryota | Sar | Ciliophora | uncultured ciliate | ||||||
| 21600657 | 21600657 | PRJNA744060_P_NODE_12537_length_452_cov_17.005277_g12209_i0 | PRJNA744060 | 12537 | 452 | 17.005277 | 76.86385204 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 265 | 5.17e-66 | NTclustered | gi|10816|emb|X04755.1| | 5911 | g12209 | i0 | 82.838 | 29.287610619469 | 303 | 45 | 66 | 4 | 70 | 369 | 354 | 652 | Tetrahymena DNA for histone H4-II | blastn | 13238 | 265 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 23676623 | 23676623 | PRJNA744060_P_NODE_51399_length_242_cov_0.923077_g51070_i0 | PRJNA744060 | 51399 | 242 | 0.923077 | 2.23384634 | Stylonychia lemnae | 5949 | SAR_Eukaryotes | SAR_Eukaryotes | 193 | 1.23e-44 | NTclustered | gi|10160|emb|X06874.1| | 5949 | g51070 | i0 | 81.07 | 90.3471074380165 | 243 | 44 | 100 | 2 | 1 | 242 | 560 | 319 | Stylonychia macronuclear beta-2 tubulin gene | blastn | 21864 | 193 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Stylonychia | Stylonychia lemnae | ||
| 25425100 | 25425100 | PRJNA744060_P_NODE_26120_length_318_cov_2.669388_g25791_i0 | PRJNA744060 | 26120 | 318 | 2.669388 | 8.48865384 | Tintinnida | 200604 | SAR_Eukaryotes | SAR_Eukaryotes | 459 | 1.5000000000000002e-124 | NTclustered | gi|23957291|gb|AF399167.1| | 1513492 | g25791 | i0 | 92.994 | 99.5345911949686 | 314 | 22 | 99 | 0 | 1 | 314 | 827 | 514 | Schmidingerella sp. LAK-2008 clone Fehr99atub_3 alpha-tubulin gene, partial cds | blastn | 31652 | 459 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Tintinnida | Rhabdonellidae | Schmidingerella | Schmidingerella sp. LAK-2008 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;