RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA744060" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA744060 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3274549 3274549 PRJNA744060_P_NODE_27583_length_310_cov_2.400844_g27254_i0 PRJNA744060 27583 310 2.400844 7.4426164 Homavirus sp. 2487769 Viruses Viruses 58.4 6.22e-4   NTclustered gi|1512477983|gb|MK072373.1| 2487769 g27254 i0 100 0.1 31 0 10 0 167 197 1674 1644 MAG: Homavirus sp. clone Homavirus_42 genomic sequence blastn 31 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.
3274827 3274827 PRJNA744060_P_NODE_42003_length_257_cov_2.826087_g41674_i0 PRJNA744060 42003 257 2.826087 7.26304359 Micromonas commoda virus 3057169 Viruses Viruses 52.8 0.023   NTclustered gi|2835088474|gb|PQ381123.1| 3057169 g41674 i0 100 0.108949416342412 28 0 11 0 27 54 178021 178048 Micromonas commoda virus isolate McV-SA1, partial genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
13477344 13477344 PRJNA744060_P_NODE_45311_length_251_cov_0.876404_g44982_i0 PRJNA744060 45311 251 0.876404 2.19977404 Cotonvirus japonicum 3059904 Viruses Viruses 65.8 2.92e-6   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g44982 i0 100 0.406374501992032 35 0 14 0 160 194 836745 836711 Cotonvirus japonicus DNA, complete genome blastn 102 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
17301680 17301680 PRJNA744060_P_NODE_49474_length_244_cov_2.280702_g49145_i0 PRJNA744060 49474 244 2.280702 5.56491288 Kratosvirus quantuckense 3060070 Viruses Viruses 63.9 1.02e-5   NTclustered gi|672550958|ref|NC_024697.1| 1474867 g49145 i0 97.297 0.532786885245902 37 1 15 0 184 220 283591 283627 Aureococcus anophagefferens virus isolate BtV-01, complete genome blastn 130 63.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae Kratosvirus Kratosvirus quantuckense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;