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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA744060" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 10 ✖

bioproject 1

  • PRJNA744060 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1998915 1998915 PRJNA744060_P_NODE_12482_length_453_cov_26.694737_g12154_i0 PRJNA744060 12482 453 26.694737 120.92715861 Karpovia croatica 2925417 Root_unresolved Root_unresolved 100 1.55e-16   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g12154 i0 88.235 13.5540838852097 85 9 19 1 341 425 6020 6103 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6140 100 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
4551714 4551714 PRJNA744060_P_NODE_25364_length_322_cov_12.188755_g25035_i0 PRJNA744060 25364 322 12.188755 39.2477911 Thecamonas trahens 529818 Root_unresolved Root_unresolved 159 1.7299999999999999e-34   NTclustered gi|923119727|ref|XM_013897883.1| 461836 g25035 i0 85 24.695652173913 160 20 49 2 165 322 350 193 Thecamonas trahens ATCC 50062 ubiquitin-60S ribosomal protein L40 (AMSG_10625), partial mRNA blastn 7952 159 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5826490 5826490 PRJNA744060_P_NODE_13345_length_439_cov_2.289617_g13016_i0 PRJNA744060 13345 439 2.289617 10.05141863 Thecamonas trahens 529818 Root_unresolved Root_unresolved 76.8 2.52e-9   NTclustered gi|923134692|ref|XM_013905358.1| 461836 g13016 i0 89.831 0.134396355353075 59 6 13 0 1 59 208 266 Thecamonas trahens ATCC 50062 60S ribosomal protein L37-A (AMSG_02263), partial mRNA blastn 59 76.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8376596 8376596 PRJNA744060_P_NODE_3107_length_878_cov_2.078261_g2847_i0 PRJNA744060 3107 878 2.078261 18.24713158 Thecamonas trahens 529818 Root_unresolved Root_unresolved 411 1.27e-109   NTclustered gi|923127182|ref|XM_013901604.1| 461836 g2847 i0 81.31 13.4236902050114 519 85 58 12 1 513 682 1194 Thecamonas trahens ATCC 50062 deoxyhypusine synthase (AMSG_06376), partial mRNA blastn 11786 411 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12202748 12202748 PRJNA744060_P_NODE_32050_length_290_cov_1.852535_g31721_i0 PRJNA744060 32050 290 1.852535 5.3723515 Thecamonas trahens 529818 Root_unresolved Root_unresolved 302 2.41e-77   NTclustered gi|923129133|ref|XM_013902579.1| 461836 g31721 i0 86.014 52.5068965517241 286 34 98 6 8 290 1119 837 Thecamonas trahens ATCC 50062 RuvB-like 1 (AMSG_05323), partial mRNA blastn 15227 302 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
13477332 13477332 PRJNA744060_P_NODE_44431_length_252_cov_1.307263_g44102_i0 PRJNA744060 44431 252 1.307263 3.29430276 Thecamonas trahens 529818 Root_unresolved Root_unresolved 191 4.64e-44   NTclustered gi|923125065|ref|XM_013900547.1| 461836 g44102 i0 85.635 43.8015873015873 181 26 72 0 36 216 859 679 Thecamonas trahens ATCC 50062 60S ribosomal protein L3 (AMSG_07514), mRNA blastn 11038 191 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18574845 18574845 PRJNA744060_P_NODE_2235_length_1011_cov_4.398721_g2013_i0 PRJNA744060 2235 1011 4.398721 44.47106931 Thecamonas trahens 529818 Root_unresolved Root_unresolved 132 1.28e-25   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g2013 i0 85.827 0.168150346191889 127 14 12 3 748 873 265 142 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 170 132 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19850104 19850104 PRJNA744060_P_NODE_20436_length_357_cov_6.323944_g20107_i0 PRJNA744060 20436 357 6.323944 22.57648008 Cavaliersmithia chaoae 3003318 Root_unresolved Root_unresolved 206 2.4499999999999998e-48   NTclustered gi|2206682172|gb|OM966645.1| 3003318 g20107 i0 89.937 42.7983193277311 159 16 45 0 1 159 6450 6608 Cavaliersmithia chaoae strain FABANU small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15279 206 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Cavaliersmithia Cavaliersmithia chaoae
19850296 19850296 PRJNA744060_P_NODE_30096_length_298_cov_2.315556_g29767_i0 PRJNA744060 30096 298 2.315556 6.90035688 Thecamonas trahens 529818 Root_unresolved Root_unresolved 159 1.59e-34   NTclustered gi|923134014|ref|XM_013905019.1| 461836 g29767 i0 83.815 1.3758389261745 173 22 57 6 8 177 1685 1854 Thecamonas trahens ATCC 50062 ABC transporter E family member 2 (AMSG_03144), mRNA blastn 410 159 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23676625 23676625 PRJNA744060_P_NODE_51539_length_241_cov_5.398810_g51210_i0 PRJNA744060 51539 241 5.39881 13.0111321 Thecamonas trahens 529818 Root_unresolved Root_unresolved 163 9.61e-36   NTclustered gi|923130274|ref|XM_013903149.1| 461836 g51210 i0 88.235 29.9087136929461 136 16 56 0 104 239 742 607 Thecamonas trahens ATCC 50062 14-3-3 family protein epsilon (AMSG_04940), partial mRNA blastn 7208 163 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;