contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1998067 | 1998067 | PRJNA743294_P_NODE_33862_length_288_cov_2.800000_g33406_i0 | PRJNA743294 | 33862 | 288 | 2.8 | 8.064 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 255 | 1.8900000000000001e-63 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g33406 | i0 | 84.133 | 119.722222222222 | 271 | 35 | 92 | 8 | 19 | 284 | 2833483 | 2833750 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 34480 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 4550628 | 4550628 | PRJNA743294_P_NODE_43504_length_259_cov_2.516129_g43048_i0 | PRJNA743294 | 43504 | 259 | 2.516129 | 6.51677411 | Verrucomicrobium sp. GAS474 | 1882831 | Bacteria | Bacteria | 134 | 8.190000000000001e-27 | NTclustered | gi|1085974270|emb|LT629781.1| | 1882831 | g43048 | i0 | 79.787 | 3.71428571428571 | 188 | 34 | 72 | 4 | 2 | 187 | 2410236 | 2410421 | Verrucomicrobiaceae bacterium GAS474 genome assembly, chromosome: I | blastn | 962 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium sp. GAS474 | |
| 4550684 | 4550684 | PRJNA743294_P_NODE_50424_length_248_cov_1.577143_g49968_i0 | PRJNA743294 | 50424 | 248 | 1.577143 | 3.91131464 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 387 | 5.409999999999998e-103 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g49968 | i0 | 94.779 | 294.358870967742 | 249 | 11 | 100 | 2 | 1 | 248 | 1320405 | 1320652 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 73001 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 8375289 | 8375289 | PRJNA743294_P_NODE_22927_length_342_cov_1.130112_g22471_i0 | PRJNA743294 | 22927 | 342 | 1.130112 | 3.86498304 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 507 | 5.74e-139 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g22471 | i0 | 95.046 | 179.520467836257 | 323 | 15 | 94 | 1 | 20 | 342 | 1482 | 1803 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 61396 | 507 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 8375413 | 8375413 | PRJNA743294_P_NODE_39687_length_270_cov_0.923858_g39231_i0 | PRJNA743294 | 39687 | 270 | 0.923858 | 2.4944166 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 361 | 3.619999999999999e-95 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g39231 | i0 | 90.775 | 90.4444444444444 | 271 | 24 | 100 | 1 | 1 | 270 | 3863306 | 3863036 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 24420 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 10127041 | 10127041 | PRJNA743294_P_NODE_50448_length_248_cov_1.491429_g49992_i0 | PRJNA743294 | 50448 | 248 | 1.491429 | 3.69874392 | Prosthecobacter | 48463 | Bacteria | Bacteria | 326 | 1.2e-84 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g49992 | i0 | 90.323 | 286 | 248 | 24 | 100 | 0 | 1 | 248 | 2466 | 2219 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 70928 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 10925810 | 10925810 | PRJNA743294_P_NODE_13109_length_441_cov_1.967391_g12653_i0 | PRJNA743294 | 13109 | 441 | 1.967391 | 8.67619431 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 416 | 1.31e-111 | NTclustered | gi|2626245913|emb|OY829953.1| | 2026772 | g12653 | i0 | 83.747 | 271.863945578231 | 443 | 68 | 100 | 4 | 1 | 441 | 679762 | 680202 | MAG: Opitutales bacterium isolate cf0dc631-26ae-4be7-9546-4b6096dd6533 genome assembly, chromosome: 1 | blastn | 119892 | 416 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 10926040 | 10926040 | PRJNA743294_P_NODE_40749_length_266_cov_4.269430_g40293_i0 | PRJNA743294 | 40749 | 266 | 4.26943 | 11.3566838 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 303 | 6.08e-78 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g40293 | i0 | 87.739 | 98.0827067669173 | 261 | 31 | 98 | 1 | 6 | 266 | 1315026 | 1315285 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 26090 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14751112 | 14751112 | PRJNA743294_P_NODE_5532_length_651_cov_3.235294_g5085_i0 | PRJNA743294 | 5532 | 651 | 3.235294 | 21.06176394 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 604 | 3.9599999999999987e-168 | NTclustered | gi|2626245913|emb|OY829953.1| | 2026772 | g5085 | i0 | 83.587 | 168.680491551459 | 658 | 94 | 100 | 14 | 1 | 651 | 678918 | 679568 | MAG: Opitutales bacterium isolate cf0dc631-26ae-4be7-9546-4b6096dd6533 genome assembly, chromosome: 1 | blastn | 109811 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 16024658 | 16024658 | PRJNA743294_P_NODE_37653_length_276_cov_1.290640_g37197_i0 | PRJNA743294 | 37653 | 276 | 1.29064 | 3.5621664 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 438 | 1.6699999999999996e-118 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g37197 | i0 | 95.29 | 262.753623188406 | 276 | 13 | 100 | 0 | 1 | 276 | 1010302 | 1010027 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 72520 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 17300311 | 17300311 | PRJNA743294_P_NODE_48274_length_251_cov_0.876404_g47818_i0 | PRJNA743294 | 48274 | 251 | 0.876404 | 2.19977404 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 459 | 1.1499999999999996e-124 | NTclustered | gi|1583980166|gb|CP036293.1| | 239935 | g47818 | i0 | 99.602 | 11 | 251 | 1 | 100 | 0 | 1 | 251 | 635762 | 636012 | Akkermansia muciniphila strain 139 chromosome, complete genome | blastn | 2761 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 17300367 | 17300367 | PRJNA743294_P_NODE_56754_length_242_cov_0.863905_g56298_i0 | PRJNA743294 | 56754 | 242 | 0.863905 | 2.0906501 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 425 | 1.11e-114 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g56298 | i0 | 98.347 | 217.954545454545 | 242 | 4 | 100 | 0 | 1 | 242 | 28058 | 28299 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 52745 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 18573654 | 18573654 | PRJNA743294_P_NODE_19635_length_366_cov_2.232082_g19179_i0 | PRJNA743294 | 19635 | 366 | 2.232082 | 8.16942012 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 588 | 2.1399999999999994e-163 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g19179 | i0 | 95.628 | 287.803278688525 | 366 | 16 | 100 | 0 | 1 | 366 | 1320105 | 1319740 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 105336 | 588 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 19849106 | 19849106 | PRJNA743294_P_NODE_3996_length_756_cov_3.345534_g3598_i0 | PRJNA743294 | 3996 | 756 | 3.345534 | 25.29223704 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1147 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g3598 | i0 | 94.071 | 139.937830687831 | 759 | 40 | 100 | 5 | 1 | 756 | 1315654 | 1316410 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 105793 | 1147 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 22399555 | 22399555 | PRJNA743294_P_NODE_39978_length_269_cov_1.331633_g39522_i0 | PRJNA743294 | 39978 | 269 | 1.331633 | 3.58209277 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 375 | 1.2899999999999998e-99 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g39522 | i0 | 91.852 | 31.4609665427509 | 270 | 20 | 100 | 2 | 1 | 269 | 1727685 | 1727417 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 8463 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 22875830 | 22875830 | PRJNA743294_P_NODE_25938_length_324_cov_1.593625_g25482_i0 | PRJNA743294 | 25938 | 324 | 1.593625 | 5.163345 | Prosthecobacter | 48463 | Bacteria | Bacteria | 599 | 8.67e-167 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g25482 | i0 | 100 | 192.839506172839 | 324 | 0 | 100 | 0 | 1 | 324 | 599 | 922 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 62480 | 599 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 23674952 | 23674952 | PRJNA743294_P_NODE_21419_length_352_cov_2.724014_g20963_i0 | PRJNA743294 | 21419 | 352 | 2.724014 | 9.58852928 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 305 | 2.31e-78 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g20963 | i0 | 82.486 | 137.215909090909 | 354 | 56 | 99 | 6 | 1 | 351 | 2749957 | 2750307 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 48300 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;