RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7576304 7576304 PRJNA743294_P_NODE_58246_length_234_cov_2.031056_g57790_i0 PRJNA743294 58246 234 2.031056 4.75267104 Acidianus 12914 Archaea Archaea 56.5 0.002   NTclustered gi|1780181985|gb|CP045482.1| 2283 g57790 i0 96.97 0.282051282051282 33 1 14 0 143 175 2184225 2184193 Acidianus ambivalens strain LEI 10 chromosome, complete genome blastn 66 56.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus ambivalens
22875802 22875802 PRJNA743294_P_NODE_13798_length_430_cov_2.495798_g13342_i0 PRJNA743294 13798 430 2.495798 10.7319314 Stenosarchaea group 2290931 Archaea Archaea 789 0   NTclustered gi|471648358|gb|KC661941.1| 29281 g13342 i0 99.767 99.9906976744186 430 1 100 0 1 430 79 508 Uncultured crenarchaeote clone LC-J-R-R3-P1-H11 16S ribosomal RNA gene, partial sequence blastn 42996 795 0.992452830188679 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23675226 23675226 PRJNA743294_P_NODE_59779_length_224_cov_4.741722_g59323_i0 PRJNA743294 59779 224 4.741722 10.62145728 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.02   NTclustered gi|323706731|gb|CP002529.1| 985053 g59323 i0 100 0.125 28 0 13 0 47 74 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;