RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA743294 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8375277 8375277 PRJNA743294_P_NODE_21347_length_353_cov_1.510714_g20891_i0 PRJNA743294 21347 353 1.510714 5.33282042 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 63.9 1.54e-5   NTclustered gi|690513297|emb|LN063706.1| 99802 g20891 i0 95.122 0.11614730878187 41 1 11 1 135 174 1066 1026 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0061638 blastn 41 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8851330 8851330 PRJNA743294_P_NODE_24487_length_332_cov_2.108108_g24031_i0 PRJNA743294 24487 332 2.108108 6.99891856 Metazoa 33208 Platyhelminthes Platyhelminthes 54.7 0.009   NTclustered gi|687231228|emb|LK397035.1| 57078 g24031 i0 100 0.38855421686747 29 0 9 0 74 102 1698 1670 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0003826 blastn 129 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
9650402 9650402 PRJNA743294_P_NODE_21448_length_352_cov_1.831541_g20992_i0 PRJNA743294 21448 352 1.831541 6.44702432 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|2318760874|ref|XM_051210051.1| 6185 g20992 i0 96.97 0.09375 33 1 9 0 178 210 2952 2984 Schistosoma haematobium uncharacterized protein (MS3_00002450), mRNA blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
12201271 12201271 PRJNA743294_P_NODE_12790_length_445_cov_13.099462_g12334_i0 PRJNA743294 12790 445 13.099462 58.2926059 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 763 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g12334 i0 97.959 0.991011235955056 441 8 99 1 6 445 12 452 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 441 763 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
22399379 22399379 PRJNA743294_P_NODE_15498_length_408_cov_1.361194_g15042_i0 PRJNA743294 15498 408 1.361194 5.55367152 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 359 2.06e-94   NTclustered gi|62199102|gb|AY967472.1| 79327 g15042 i0 83.641 93.3774509803922 379 60 93 2 17 394 455 78 Schmidtea mediterranea clone HE.1.01H mRNA sequence blastn 38098 359 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
22399521 22399521 PRJNA743294_P_NODE_34418_length_286_cov_2.774648_g33962_i0 PRJNA743294 34418 286 2.774648 7.93549328 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|690483390|emb|LN026454.1| 99802 g33962 i0 100 0.398601398601399 30 0 10 0 88 117 4455 4426 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0025969 blastn 114 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;