contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13475998 | 13475998 | PRJNA743294_P_NODE_47051_length_252_cov_1.212291_g46595_i0 | PRJNA743294 | 47051 | 252 | 1.212291 | 3.05497332 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 91.6 | 4.84e-14 | NTclustered | gi|1376142707|ref|XM_024651685.1| | 34506 | g46595 | i0 | 80.833 | 2.80555555555556 | 120 | 19 | 47 | 4 | 59 | 176 | 1379 | 1496 | Strongyloides ratti SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (SRAE_2000080800), partial mRNA | blastn | 707 | 91.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 13952250 | 13952250 | PRJNA743294_P_NODE_17711_length_383_cov_2.822581_g17255_i0 | PRJNA743294 | 17711 | 383 | 2.822581 | 10.81048523 | root | 1 | Root_unresolved | Root_unresolved | 63.9 | 1.69e-5 | NTclustered | gi|2707583670|ref|XM_064197987.1| | 51031 | g17255 | i0 | 79.167 | 2.23237597911227 | 96 | 16 | 25 | 3 | 12 | 105 | 3655 | 3562 | Necator americanus uncharacterized protein (RB195_001282), partial mRNA | blastn | 855 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Necator | Necator americanus | |
| 17300354 | 17300354 | PRJNA743294_P_NODE_54894_length_243_cov_2.935294_g54438_i0 | PRJNA743294 | 54894 | 243 | 2.935294 | 7.13276442 | Pristionchus sp. 15 RS5229 | 452809 | Nematoda | Nematoda | 180 | 9.63e-41 | NTclustered | gi|150982261|gb|EF634719.1| | 452809 | g54438 | i0 | 88.889 | 15.0905349794239 | 144 | 16 | 59 | 0 | 89 | 232 | 303 | 160 | Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds | blastn | 3667 | 180 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 15 RS5229 | |
| 19050076 | 19050076 | PRJNA743294_P_NODE_33335_length_290_cov_2.046083_g32879_i0 | PRJNA743294 | 33335 | 290 | 2.046083 | 5.9336407 | Metazoa | 33208 | Nematoda | Nematoda | 195 | 4.22e-45 | NTclustered | gi|23306675|gb|AY137471.1| | 6233 | g32879 | i0 | 81.481 | 72.2448275862069 | 243 | 40 | 83 | 3 | 6 | 247 | 839 | 601 | Panagrellus redivivus heat shock protein 70-C mRNA, complete cds | blastn | 20951 | 196 | 0.994897959183674 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Panagrellus | Panagrellus redivivus | |
| 19848912 | 19848912 | PRJNA743294_P_NODE_14796_length_417_cov_1.360465_g14340_i0 | PRJNA743294 | 14796 | 417 | 1.360465 | 5.67313905 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 364 | 4.5399999999999985e-96 | NTclustered | gi|1376147725|ref|XM_024654528.1| | 34506 | g14340 | i0 | 82.968 | 99.052757793765 | 411 | 62 | 98 | 7 | 9 | 415 | 679 | 1085 | Strongyloides ratti ATP synthase subunit alpha, mitochondrial (SRAE_2000334600), partial mRNA | blastn | 41305 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 20324807 | 20324807 | PRJNA743294_P_NODE_55476_length_243_cov_0.917647_g55020_i0 | PRJNA743294 | 55476 | 243 | 0.917647 | 2.22988221 | Metazoa | 33208 | Nematoda | Nematoda | 54.7 | 0.006 | NTclustered | gi|268554987|ref|XM_002635436.1| | 6238 | g55020 | i0 | 92.105 | 0.390946502057613 | 38 | 3 | 16 | 0 | 24 | 61 | 335 | 298 | Caenorhabditis briggsae Protein CBG08779 (CBG08779), partial mRNA | blastn | 95 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 21124433 | 21124433 | PRJNA743294_P_NODE_11577_length_466_cov_21.501272_g11121_i0 | PRJNA743294 | 11577 | 466 | 21.501272 | 100.19592752 | Pristionchus pauli | 376545 | Nematoda | Nematoda | 292 | 2.4499999999999994e-74 | NTclustered | gi|150982019|gb|EF634598.1| | 376545 | g11121 | i0 | 81.492 | 5.57510729613734 | 362 | 61 | 77 | 6 | 63 | 421 | 37 | 395 | Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 2598 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pauli | |
| 21124531 | 21124531 | PRJNA743294_P_NODE_23797_length_336_cov_3.311787_g23341_i0 | PRJNA743294 | 23797 | 336 | 3.311787 | 11.12760432 | Trichinella spiralis | 6334 | Nematoda | Nematoda | 52.8 | 0.032 | NTclustered | gi|339245486|ref|XM_003378621.1| | 6334 | g23341 | i0 | 100 | 0.0833333333333333 | 28 | 0 | 8 | 0 | 297 | 324 | 278 | 251 | Trichinella spiralis cysteine-rich hydrophobic domain 2 protein (Tsp_06601) mRNA, complete cds | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella spiralis | |
| 22875797 | 22875797 | PRJNA743294_P_NODE_11878_length_461_cov_3.090206_g11422_i0 | PRJNA743294 | 11878 | 461 | 3.090206 | 14.24584966 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 477 | 6.229999999999998e-130 | NTclustered | gi|1376144465|ref|XM_024652690.1| | 34506 | g11422 | i0 | 85.621 | 100.297180043384 | 459 | 60 | 99 | 5 | 6 | 461 | 488 | 33 | Strongyloides ratti Actin, alpha cardiac muscle 1 (SRAE_2000170700), partial mRNA | blastn | 46237 | 481 | 0.991683991683992 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 23675187 | 23675187 | PRJNA743294_P_NODE_53239_length_245_cov_1.470930_g52783_i0 | PRJNA743294 | 53239 | 245 | 1.47093 | 3.6037785 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 128 | 3.57e-25 | NTclustered | gi|687022647|emb|LM525561.1| | 174720 | g52783 | i0 | 83.571 | 12.2571428571429 | 140 | 19 | 56 | 4 | 31 | 168 | 124953 | 124816 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000006 | blastn | 3003 | 128 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 24948684 | 24948684 | PRJNA743294_P_NODE_57120_length_240_cov_2.329341_g56664_i0 | PRJNA743294 | 57120 | 240 | 2.329341 | 5.5904184 | Bunonema sp. VS-2014 | 1538689 | Nematoda | Nematoda | 174 | 4.42e-39 | NTclustered | gi|675119005|gb|KJ877382.1| | 1538689 | g56664 | i0 | 82.828 | 2.35833333333333 | 198 | 30 | 82 | 4 | 45 | 240 | 145 | 340 | Bunonema sp. VS-2014 strain RS9014 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 566 | 174 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Bunonematidae | Bunonema | Bunonema sp. VS-2014 | |
| 24948696 | 24948696 | PRJNA743294_P_NODE_58500_length_232_cov_3.383648_g58044_i0 | PRJNA743294 | 58500 | 232 | 3.383648 | 7.85006336 | Pristionchus maxplancki | 1317128 | Nematoda | Nematoda | 135 | 2e-27 | NTclustered | gi|478487033|gb|KC491696.1| | 1317128 | g58044 | i0 | 81.065 | 1.40086206896552 | 169 | 32 | 73 | 0 | 48 | 216 | 177 | 9 | Pristionchus maxplancki strain RS5594 small subunit ribosomal protein 1 (rps1) gene, partial cds | blastn | 325 | 135 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus maxplancki |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;