contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2473733 | 2473733 | PRJNA743294_P_NODE_36282_length_280_cov_1.903382_g35826_i0 | PRJNA743294 | 36282 | 280 | 1.903382 | 5.3294696 | root | 1 | Root_unresolved | Root_unresolved | 84.2 | 9.15e-12 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g35826 | i0 | 84.706 | 1.85357142857143 | 85 | 11 | 30 | 2 | 2 | 85 | 10635113 | 10635196 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 519 | 84.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 3273337 | 3273337 | PRJNA743294_P_NODE_29203_length_307_cov_3.662393_g28747_i0 | PRJNA743294 | 29203 | 307 | 3.662393 | 11.24354651 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 473 | 5.159999999999999e-129 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g28747 | i0 | 94.737 | 134.221498371336 | 304 | 16 | 99 | 0 | 4 | 307 | 7090457 | 7090154 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 41206 | 473 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 4550685 | 4550685 | PRJNA743294_P_NODE_50444_length_248_cov_1.508571_g49988_i0 | PRJNA743294 | 50444 | 248 | 1.508571 | 3.74125608 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 255 | 1.59e-63 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g49988 | i0 | 85.484 | 144.826612903226 | 248 | 32 | 99 | 4 | 3 | 248 | 3449580 | 3449825 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 35917 | 255 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 5825490 | 5825490 | PRJNA743294_P_NODE_15745_length_405_cov_1.524096_g15289_i0 | PRJNA743294 | 15745 | 405 | 1.524096 | 6.1725888 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 339 | 2.66e-88 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g15289 | i0 | 83.024 | 66.683950617284 | 377 | 60 | 93 | 4 | 3 | 377 | 7614356 | 7614730 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 27007 | 339 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 5825595 | 5825595 | PRJNA743294_P_NODE_29005_length_308_cov_3.114894_g28549_i0 | PRJNA743294 | 29005 | 308 | 3.114894 | 9.59387352 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 414 | 3.18e-111 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g28549 | i0 | 90.939 | 145.00974025974 | 309 | 26 | 100 | 2 | 1 | 308 | 7090147 | 7090454 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 44663 | 414 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 8375242 | 8375242 | PRJNA743294_P_NODE_17507_length_385_cov_5.253205_g17051_i0 | PRJNA743294 | 17507 | 385 | 5.253205 | 20.22483925 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 645 | 1.3299999999999995e-180 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g17051 | i0 | 97.12 | 144.677922077922 | 382 | 11 | 99 | 0 | 1 | 382 | 3943769 | 3944150 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 55701 | 645 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10925982 | 10925982 | PRJNA743294_P_NODE_34149_length_287_cov_2.462617_g33693_i0 | PRJNA743294 | 34149 | 287 | 2.462617 | 7.06771079 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 374 | 4.989999999999998e-99 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g33693 | i0 | 90.526 | 146.418118466899 | 285 | 24 | 99 | 3 | 5 | 287 | 3489737 | 3490020 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 42022 | 374 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 11402053 | 11402053 | PRJNA743294_P_NODE_35369_length_283_cov_2.080952_g34913_i0 | PRJNA743294 | 35369 | 283 | 2.080952 | 5.88909416 | Myxococcus | 32 | Bacteria | Bacteria | 433 | 7.98e-117 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g34913 | i0 | 94.326 | 248.780918727915 | 282 | 16 | 99 | 0 | 2 | 283 | 379477 | 379196 | Myxococcus xanthus strain DK1050 chromosome | blastn | 70405 | 433 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 14750936 | 14750936 | PRJNA743294_P_NODE_30852_length_300_cov_1.792952_g30396_i0 | PRJNA743294 | 30852 | 300 | 1.792952 | 5.378856 | Myxococcus landrumensis | 2813577 | Bacteria | Bacteria | 130 | 1.25e-25 | NTclustered | gi|1998497960|gb|CP071091.1| | 2813577 | g30396 | i0 | 83.571 | 1.52666666666667 | 140 | 21 | 46 | 2 | 1 | 139 | 8666373 | 8666235 | Myxococcus landrumus strain SCHIC003 chromosome | blastn | 458 | 130 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus landrumensis | ||
| 14751084 | 14751084 | PRJNA743294_P_NODE_51592_length_247_cov_0.896552_g51136_i0 | PRJNA743294 | 51592 | 247 | 0.896552 | 2.21448344 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 211 | 3.48e-50 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g51136 | i0 | 82.258 | 17.587044534413 | 248 | 40 | 100 | 4 | 1 | 247 | 3589459 | 3589215 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 4344 | 211 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 15226902 | 15226902 | PRJNA743294_P_NODE_49492_length_249_cov_1.693182_g49036_i0 | PRJNA743294 | 49492 | 249 | 1.693182 | 4.21602318 | Myxococcaceae | 31 | Bacteria | Bacteria | 84.2 | 7.99e-12 | NTclustered | gi|337255776|gb|CP002830.1| | 35 | g49036 | i0 | 86.667 | 7.0281124497992 | 75 | 10 | 30 | 0 | 175 | 249 | 3991226 | 3991152 | Myxococcus macrosporus strain HW-1, complete genome | blastn | 1750 | 84.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 19849141 | 19849141 | PRJNA743294_P_NODE_44716_length_256_cov_2.459016_g44260_i0 | PRJNA743294 | 44716 | 256 | 2.459016 | 6.29508096 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|520999024|gb|CP003969.1| | 1254432 | g44260 | i0 | 100 | 0.11328125 | 29 | 0 | 11 | 0 | 82 | 110 | 5442557 | 5442529 | Sorangium cellulosum So0157-2, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 19849228 | 19849228 | PRJNA743294_P_NODE_55956_length_242_cov_1.940828_g55500_i0 | PRJNA743294 | 55956 | 242 | 1.940828 | 4.69680376 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 396 | 8.739999999999996e-106 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g55500 | i0 | 96.266 | 196.785123966942 | 241 | 9 | 99 | 0 | 2 | 242 | 3943510 | 3943750 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 47622 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 20324788 | 20324788 | PRJNA743294_P_NODE_4816_length_694_cov_4.056361_g4388_i0 | PRJNA743294 | 4816 | 694 | 4.056361 | 28.15114534 | Myxococcia | 32015 | Bacteria | Bacteria | 1053 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g4388 | i0 | 94.203 | 150.515850144092 | 690 | 40 | 99 | 0 | 1 | 690 | 7089517 | 7090206 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 104458 | 1062 | 0.991525423728814 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 21600550 | 21600550 | PRJNA743294_P_NODE_59357_length_228_cov_2.264516_g58901_i0 | PRJNA743294 | 59357 | 228 | 2.264516 | 5.16309648 | Stigmatella | 40 | Bacteria | Bacteria | 222 | 1.46e-53 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g58901 | i0 | 84.821 | 297.5 | 224 | 31 | 98 | 3 | 6 | 228 | 1489 | 1710 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 67830 | 222 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 22399478 | 22399478 | PRJNA743294_P_NODE_28538_length_310_cov_5.101266_g28082_i0 | PRJNA743294 | 28538 | 310 | 5.101266 | 15.8139246 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 416 | 8.91e-112 | NTclustered | gi|2244675|emb|X87291.1| | 41 | g28082 | i0 | 91.026 | 368.348387096774 | 312 | 23 | 100 | 5 | 1 | 310 | 319 | 11 | S.aurantiaca 23S rRNA gene | blastn | 114188 | 416 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 22875836 | 22875836 | PRJNA743294_P_NODE_33838_length_288_cov_3.855814_g33382_i0 | PRJNA743294 | 33838 | 288 | 3.855814 | 11.10474432 | Stigmatella | 40 | Bacteria | Bacteria | 183 | 9.059999999999997e-42 | NTclustered | gi|2244675|emb|X87291.1| | 41 | g33382 | i0 | 84.127 | 48.0486111111111 | 189 | 30 | 66 | 0 | 99 | 287 | 1316 | 1504 | S.aurantiaca 23S rRNA gene | blastn | 13838 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;