RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
722125 722125 PRJNA743294_P_NODE_47941_length_251_cov_0.876404_g47485_i0 PRJNA743294 47941 251 0.876404 2.19977404 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 4.85e-9   NTclustered gi|448278458|gb|KC137554.1| 1289055 g47485 i0 95.652 0.183266932270916 46 2 18 0 176 221 2962 2917 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
3273567 3273567 PRJNA743294_P_NODE_57563_length_237_cov_3.603659_g57107_i0 PRJNA743294 57563 237 3.603659 8.54067183 Mitosporidium daphniae 1485682 Fungi Fungi 60.2 1.27e-4   NTclustered gi|914965904|ref|XM_013384195.1| 1485682 g57107 i0 97.143 0.270042194092827 35 1 15 0 151 185 151 185 Mitosporidium daphniae uncharacterized protein (DI09_103p60), partial mRNA blastn 64 60.2 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
16501296 16501296 PRJNA743294_P_NODE_23933_length_335_cov_6.492366_g23477_i0 PRJNA743294 23933 335 6.492366 21.7494261 Fungi 4751 Fungi Fungi 183 1.0699999999999998e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g23477 i0 95.652 35.9313432835821 115 4 34 1 58 172 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12037 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;