RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10126987 10126987 PRJNA743294_P_NODE_16448_length_397_cov_2.697531_g15992_i0 PRJNA743294 16448 397 2.697531 10.70919807 Opisthokonta 33154 Echinodermata other_Eukaryota 237 9.780000000000001e-58   NTclustered gi|2037969038|ref|XM_041596501.1| 7654 g15992 i0 80.769 70.2569269521411 312 52 78 8 16 323 106 413 PREDICTED: Lytechinus variegatus late histone H2A.2.2-like (LOC121405574), mRNA blastn 27892 239 0.99163179916318 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
10925968 10925968 PRJNA743294_P_NODE_32789_length_292_cov_1.990868_g32333_i0 PRJNA743294 32789 292 1.990868 5.81333456 Diadema antillarum 105358 Echinodermata other_Eukaryota 54.7 0.008   NTclustered gi|2919357551|ref|XM_071628544.1| 105358 g32333 i0 94.286 0.431506849315068 35 2 12 0 1 35 746 780 PREDICTED: Diadema antillarum insulinoma-associated protein 1a-like (LOC139717025), mRNA blastn 126 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
14750805 14750805 PRJNA743294_P_NODE_12252_length_455_cov_2.274869_g11796_i0 PRJNA743294 12252 455 2.274869 10.35065395 Lytechinus pictus 7653 Echinodermata other_Eukaryota 52.8 0.044   NTclustered gi|2707382156|ref|XM_064111297.1| 7653 g11796 i0 96.774 0.0681318681318681 31 1 7 0 423 453 1768 1798 PREDICTED: Lytechinus pictus uncharacterized LOC129279215 (LOC129279215), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;