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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA743294 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
722116 722116 PRJNA743294_P_NODE_45861_length_253_cov_3.438889_g45405_i0 PRJNA743294 45861 253 3.438889 8.70038917 Bodomorpha sp. Panama105 555789 SAR_Eukaryotes SAR_Eukaryotes 468 1.92e-127   NTclustered gi|219524917|gb|EU709280.1| 555789 g45405 i0 100 86.4189723320158 253 0 100 0 1 253 1621 1369 Bodomorpha sp. Panama105 18S ribosomal RNA gene, partial sequence blastn 21864 468 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. Panama105
1998180 1998180 PRJNA743294_P_NODE_5262_length_667_cov_2.627946_g4817_i0 PRJNA743294 5262 667 2.627946 17.52839982 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1072 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g4817 i0 95.652 97.6911544227886 667 29 100 0 1 667 107 773 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 65160 1072 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3273244 3273244 PRJNA743294_P_NODE_14883_length_415_cov_13.295322_g14427_i0 PRJNA743294 14883 415 13.295322 55.1755863 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 756 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g14427 i0 99.518 101.332530120482 415 2 100 0 1 415 3091 2677 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 42053 756 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3273300 3273300 PRJNA743294_P_NODE_2243_length_976_cov_18.296788_g1928_i0 PRJNA743294 2243 976 18.296788 178.57665088 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 65.8 1.27e-5   NTclustered gi|413965549|gb|AC254076.1| 227086 g1928 i0 79.57 0.998975409836066 93 17 9 2 332 423 450 359 Bigelowiella natans clone JGIFHCC-65K07, complete sequence blastn 975 65.8 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
3273347 3273347 PRJNA743294_P_NODE_31063_length_299_cov_1.867257_g30607_i0 PRJNA743294 31063 299 1.867257 5.58309843 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 228 4.2999999999999994e-55   NTclustered gi|238617630|gb|FJ973394.1| 188950 g30607 i0 81.655 77.9130434782609 278 47 92 4 19 294 579 304 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 23296 228 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3273603 3273603 PRJNA743294_P_NODE_7783_length_562_cov_2.676892_g7328_i0 PRJNA743294 7783 562 2.676892 15.04413304 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 479 2.1399999999999993e-130   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g7328 i0 87.239 33.211743772242 431 41 76 6 5 430 2448 2869 Rosculus vulgaris isolate CCA sequence blastn 18665 479 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
12677934 12677934 PRJNA743294_P_NODE_41170_length_265_cov_2.989583_g40714_i0 PRJNA743294 41170 265 2.989583 7.92239495 Sandona 1239209 SAR_Eukaryotes SAR_Eukaryotes 490 4.3299999999999986e-134   NTclustered gi|2163362299|dbj|LC663795.1| 563755 g40714 i0 100 99.9471698113207 265 0 100 0 1 265 603 867 Sandona mutans Flagella An1019C gene for 18S rRNA, partial sequence blastn 26486 490 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
13476025 13476025 PRJNA743294_P_NODE_49611_length_249_cov_1.329545_g49155_i0 PRJNA743294 49611 249 1.329545 3.31056705 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 422 1.49e-113   NTclustered gi|238617630|gb|FJ973394.1| 188950 g49155 i0 97.189 98.8433734939759 249 7 100 0 1 249 140 388 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 24612 422 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14750820 14750820 PRJNA743294_P_NODE_13252_length_438_cov_20.942466_g12796_i0 PRJNA743294 13252 438 20.942466 91.72800108 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 361 6.19e-95   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12796 i0 83.871 53.8150684931507 403 39 91 19 1 398 3658 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 23571 361 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14750907 14750907 PRJNA743294_P_NODE_26472_length_321_cov_1.540323_g26016_i0 PRJNA743294 26472 321 1.540323 4.94443683 Chlorarachniophyceae sp. 2303673 SAR_Eukaryotes SAR_Eukaryotes 207 6.07e-49   NTclustered gi|2071061694|gb|MZ611732.1| 2303673 g26016 i0 79.479 62.1059190031153 307 51 95 12 6 309 664 961 Chlorarachniophyceae sp. isolate AL-FL05 small subunit ribosomal RNA gene, partial sequence blastn 19936 207 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp.
16024765 16024765 PRJNA743294_P_NODE_51993_length_246_cov_4.294798_g51537_i0 PRJNA743294 51993 246 4.294798 10.56520308 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 254 5.68e-63   NTclustered gi|238617605|gb|FJ973380.1| 45107 g51537 i0 85.433 48.1788617886179 254 25 100 7 1 246 1881 1632 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 11852 254 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
18573942 18573942 PRJNA743294_P_NODE_60395_length_209_cov_10.426471_g59939_i0 PRJNA743294 60395 209 10.426471 21.79132439 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 387 4.42e-103   NTclustered gi|238617602|gb|FJ973377.1| 188950 g59939 i0 100 100.311004784689 209 0 100 0 1 209 828 1036 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 20965 387 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21124752 21124752 PRJNA743294_P_NODE_53217_length_245_cov_1.540698_g52761_i0 PRJNA743294 53217 245 1.540698 3.7747101 Rosculus cf. ithacus CCAP 1571/3 1808993 SAR_Eukaryotes SAR_Eukaryotes 239 1.5799999999999998e-58   NTclustered gi|1002343692|gb|KU738570.1| 1808993 g52761 i0 99.242 17.930612244898 132 1 54 0 1 132 1127 1258 Rosculus cf. ithacus CCAP 1571/3 18S ribosomal RNA gene, partial sequence blastn 4393 239 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus cf. ithacus CCAP 1571/3
22399538 22399538 PRJNA743294_P_NODE_37098_length_277_cov_3.539216_g36642_i0 PRJNA743294 37098 277 3.539216 9.80362832 Cercomonas sp. HFCC500 458865 SAR_Eukaryotes SAR_Eukaryotes 484 2.1199999999999996e-132   NTclustered gi|161015654|gb|EF666119.1| 458865 g36642 i0 98.545 99.6462093862816 275 3 99 1 3 277 275 2 Cercomonas sp. HFCC500 28S ribosomal RNA gene, partial sequence blastn 27602 484 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC500
22399654 22399654 PRJNA743294_P_NODE_53858_length_244_cov_16.239766_g53402_i0 PRJNA743294 53858 244 16.239766 39.62502904 Eocercomonas perecta 1043734 SAR_Eukaryotes SAR_Eukaryotes 425 1.1299999999999999e-114   NTclustered gi|336245462|gb|HM536153.1| 1043734 g53402 i0 98.354 99.4467213114754 243 3 99 1 1 243 227 468 Eocercomonas perecta strain HFCC 908 18S ribosomal RNA gene, partial sequence blastn 24265 425 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Eocercomonas Eocercomonas perecta
23674864 23674864 PRJNA743294_P_NODE_11059_length_476_cov_10.873449_g10603_i0 PRJNA743294 11059 476 10.873449 51.75761724 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 765 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g10603 i0 95.625 22.0819327731092 480 16 100 5 1 476 330 808 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 10511 765 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23674912 23674912 PRJNA743294_P_NODE_16339_length_398_cov_3.710769_g15883_i0 PRJNA743294 16339 398 3.710769 14.76886062 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 680 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g15883 i0 97.487 89.8793969849246 398 10 100 0 1 398 783 386 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 35772 680 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24948704 24948704 PRJNA743294_P_NODE_59800_length_223_cov_9.740000_g59344_i0 PRJNA743294 59800 223 9.74 21.7202 Cercomonas sp. C59 372078 SAR_Eukaryotes SAR_Eukaryotes 244 3.04e-60   NTclustered gi|88792584|gb|DQ386165.1| 372078 g59344 i0 86.58 80.4932735426009 231 19 99 8 3 223 2738 2510 Cercomonas sp. C59 28S ribosomal RNA gene, partial sequence blastn 17950 244 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. C59

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;