RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 7 ✖

bioproject 1

  • PRJNA743294 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3273375 3273375 PRJNA743294_P_NODE_34243_length_287_cov_1.677570_g33787_i0 PRJNA743294 34243 287 1.67757 4.8146259 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.027   NTclustered gi|2058072134|tpg|BK042964.1| 2832643 g33787 i0 96.774 0.10801393728223 31 1 11 0 127 157 8785 8815 MAG TPA_asm: Caudoviricetes sp. isolate ct6Al7, partial genome blastn 31 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5026571 5026571 PRJNA743294_P_NODE_35204_length_284_cov_1.203791_g34748_i0 PRJNA743294 35204 284 1.203791 3.41876644 Jamesmcgillvirus 2948768 Viruses Viruses 507 4.66e-139   NTclustered gi|48697070|ref|NC_005884.1| 270673 g34748 i0 98.94 10.9683098591549 283 3 99 0 2 284 2803 3085 Pseudomonas phage PaP2, complete genome blastn 3115 507 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Fredfastierviridae Jamesmcgillvirus Pseudomonas phage PaP2
6302365 6302365 PRJNA743294_P_NODE_45685_length_254_cov_1.685083_g45229_i0 PRJNA743294 45685 254 1.685083 4.28011082 Kayvirus 1857843 Viruses Viruses 52.8 0.023   NTclustered gi|1841992804|ref|NC_047723.1| 1195077 g45229 i0 100 1.10236220472441 28 0 11 0 132 159 22783 22756 Staphylococcus phage A3R, complete genome blastn 280 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Kayvirus Kayvirus G1
7100571 7100571 PRJNA743294_P_NODE_10706_length_484_cov_3.420925_g10250_i0 PRJNA743294 10706 484 3.420925 16.557277 Nairobivirus nv36 3430989 Viruses Viruses 54.7 0.013   NTclustered gi|1503528737|gb|MH884513.1| 2419622 g10250 i0 100 0.597107438016529 29 0 6 0 181 209 21547 21575 Bacillus phage vB_BpsS-36, complete genome blastn 289 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Ehrlichviridae Nairobivirus Nairobivirus nv36
7100930 7100930 PRJNA743294_P_NODE_58626_length_232_cov_2.113208_g58170_i0 PRJNA743294 58626 232 2.113208 4.90264256 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.006   NTclustered gi|2057837639|tpg|BK055660.1| 2832643 g58170 i0 92.308 0.168103448275862 39 1 16 2 157 194 23089 23052 MAG TPA_asm: Caudoviricetes sp. isolate ctdwb5, partial genome blastn 39 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16024567 16024567 PRJNA743294_P_NODE_25573_length_326_cov_1.766798_g25117_i0 PRJNA743294 25573 326 1.766798 5.75976148 Metrivirus ME3 2560269 Viruses Viruses 52.8 0.031   NTclustered gi|1631917922|ref|NC_041884.1| 1837876 g25117 i0 100 0.0858895705521472 28 0 9 0 167 194 100728 100755 Acinetobacter phage vB_AbaM_ME3, complete genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Metrivirus Metrivirus ME3
20324786 20324786 PRJNA743294_P_NODE_47436_length_252_cov_0.871508_g46980_i0 PRJNA743294 47436 252 0.871508 2.19620016 Pahexavirus 1982251 Viruses Viruses 444 3.2299999999999996e-120   NTclustered gi|408905844|ref|NC_018849.1| 1229788 g46980 i0 98.413 80.1150793650794 252 4 100 0 1 252 14991 14740 Propionibacterium phage P105, complete genome blastn 20189 444 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus P105

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;