RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA743294 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
722054 722054 PRJNA743294_P_NODE_37021_length_278_cov_1.165854_g36565_i0 PRJNA743294 37021 278 1.165854 3.24107412 Hokovirus HKV1 1977638 Viruses Viruses 58.4 5.5e-4   NTclustered gi|1174571934|gb|KY684105.1| 1977638 g36565 i0 94.595 1.68705035971223 37 2 13 0 65 101 326051 326015 Hokovirus HKV1 isolate HKV1 clone Hokovirus_3, sequence blastn 469 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
10926023 10926023 PRJNA743294_P_NODE_38889_length_272_cov_1.567839_g38433_i0 PRJNA743294 38889 272 1.567839 4.26452208 Biavirus raunefjordenense 3059777 Viruses Viruses 54.7 0.007   NTclustered gi|2500387999|ref|NC_077221.1| 1499987 g38433 i0 100 0.106617647058824 29 0 11 0 165 193 1034006 1034034 Prymnesium kappa virus genome assembly, chromosome: 1 blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae Biavirus Biavirus raunefjordenense
14751120 14751120 PRJNA743294_P_NODE_57112_length_240_cov_2.371257_g56656_i0 PRJNA743294 57112 240 2.371257 5.6910168 Mimivirus LCMiAC02 2506609 Viruses Viruses 52.8 0.022   NTclustered gi|1588062707|gb|MK500412.1| 2506609 g56656 i0 100 0.116666666666667 28 0 12 0 25 52 14757 14784 MAG: Mimivirus LCMiAC02 genomic sequence blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC02
21124647 21124647 PRJNA743294_P_NODE_397_length_1775_cov_4.303173_g303_i0 PRJNA743294 397 1775 4.303173 76.38132075 Fadolivirus algeromassiliense 3060017 Viruses Viruses 58.4 0.004   NTclustered gi|2500384359|ref|NC_077067.1| 3060017 g303 i0 100 0.0343661971830986 31 0 2 0 1063 1093 465950 465980 Fadolivirus 1 strain FV1/VV64, partial genome blastn 61 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;