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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 25 ✖

bioproject 1

  • PRJNA743294 · 25 ✖

analysis 1

  • blastn · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
722160 722160 PRJNA743294_P_NODE_53601_length_245_cov_0.906977_g53145_i0 PRJNA743294 53601 245 0.906977 2.22209365 Haematococcus lacustris 44745 Plants Plants 243 1.22e-59   NTclustered gi|1279575454|gb|MF683078.1| 44745 g53145 i0 84.959 263.073469387755 246 29 99 6 1 242 3233 3474 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 64453 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
1198305 1198305 PRJNA743294_P_NODE_28761_length_309_cov_4.923729_g28305_i0 PRJNA743294 28761 309 4.923729 15.21432261 Eukaryota 2759 Plants Plants 215 3.48e-51   NTclustered gi|2082237330|ref|XM_001689650.2| 3055 g28305 i0 79.599 9.9126213592233 299 61 97 0 11 309 1960 1662 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g042750v5), mRNA blastn 3063 215 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1997909 1997909 PRJNA743294_P_NODE_13222_length_439_cov_2.267760_g12766_i0 PRJNA743294 13222 439 2.26776 9.9554664 Monoraphidium neglectum 145388 Plants Plants 158 8.739999999999999e-34   NTclustered gi|926787842|ref|XM_014046941.1| 145388 g12766 i0 76.699 0.815489749430524 309 56 68 13 1 300 1167 1468 Monoraphidium neglectum cytidylate kinase mRNA blastn 358 158 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
1998230 1998230 PRJNA743294_P_NODE_59182_length_229_cov_2.217949_g58726_i0 PRJNA743294 59182 229 2.217949 5.07910321 Volvox carteri 3067 Plants Plants 115 2.57e-21   NTclustered gi|302847515|ref|XM_002955246.1| 3068 g58726 i0 91.566 1.16593886462882 83 7 36 0 117 199 1538 1456 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_96220), partial mRNA blastn 267 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
3273263 3273263 PRJNA743294_P_NODE_18023_length_380_cov_3.964169_g17567_i0 PRJNA743294 18023 380 3.964169 15.0638422 Auxenochlorella protothecoides 3075 Plants Plants 350 1.15e-91   NTclustered gi|760439522|ref|XM_011398528.1| 3075 g17567 i0 83.508 34.1421052631579 382 55 99 7 2 379 1218 841 Auxenochlorella protothecoides Catalase isozyme 2 partial mRNA blastn 12974 350 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
3273514 3273514 PRJNA743294_P_NODE_51403_length_247_cov_1.431034_g50947_i0 PRJNA743294 51403 247 1.431034 3.53465398 Chlorella variabilis 554065 Plants Plants 169 2.1199999999999996e-37   NTclustered gi|552846838|ref|XM_005851654.1| 554065 g50947 i0 79.435 8.55060728744939 248 44 99 7 2 245 858 614 Chlorella variabilis hypothetical protein (CHLNCDRAFT_29172) mRNA, complete cds blastn 2112 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
3750092 3750092 PRJNA743294_P_NODE_60543_length_206_cov_39.939850_g60087_i0 PRJNA743294 60543 206 39.93985 82.276091 Eukaryota 2759 Plants Plants 375 9.41e-100   NTclustered gi|1898545223|gb|MT951391.1| 3078 g60087 i0 99.517 100.485436893204 207 0 100 1 1 206 1224 1430 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 20700 375 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
5026561 5026561 PRJNA743294_P_NODE_28744_length_309_cov_114.889831_g28288_i0 PRJNA743294 28744 309 114.889831 355.00957779 Eukaryota 2759 Plants Plants 566 8.33e-157   NTclustered gi|1201359270|gb|MF040792.1| 3078 g28288 i0 99.676 100 309 1 100 0 1 309 71 379 Auxenochlorella pyrenoidosa isolate HIT9 18S ribosomal RNA gene, partial sequence blastn 30900 566 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
5825629 5825629 PRJNA743294_P_NODE_32885_length_292_cov_1.365297_g32429_i0 PRJNA743294 32885 292 1.365297 3.98666724 Trebouxia sp. SL0000003 3350044 Plants Plants 159 1.55e-34   NTclustered gi|2917929692|emb|OZ234919.1| 3350044 g32429 i0 85.35 52.8390410958904 157 19 53 4 80 234 69431 69585 Trebouxia sp. SL0000003 genome assembly, chromosome: 14 blastn 15429 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
7100828 7100828 PRJNA743294_P_NODE_43206_length_260_cov_1.748663_g42750_i0 PRJNA743294 43206 260 1.748663 4.5465238 Desmochloris mollenhaueri 578869 Plants Plants 475 1.1899999999999999e-129   NTclustered gi|313476264|emb|FM882217.1| 578869 g42750 i0 99.617 100.407692307692 261 0 100 1 1 260 928 668 Desmochloris sp. TP-2008 partial 18S rRNA gene, ITS1, 5.8S rRNA and ITS2, strain CCAP 6006/2 blastn 26106 475 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris mollenhaueri
8375368 8375368 PRJNA743294_P_NODE_3407_length_814_cov_5.232119_g3033_i0 PRJNA743294 3407 814 5.232119 42.58944866 Chlamydomonas reinhardtii 3055 Plants Plants 416 2.52e-111   NTclustered gi|2082235498|ref|XM_001700320.2| 3055 g3033 i0 84.87 53.5135135135135 423 53 52 5 358 779 460 48 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA blastn 43560 416 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8851341 8851341 PRJNA743294_P_NODE_3327_length_823_cov_4.704000_g2957_i0 PRJNA743294 3327 823 4.704 38.71392 Eukaryota 2759 Plants Plants 411 1.19e-109   NTclustered gi|2082269113|ref|XM_001691580.2| 3055 g2957 i0 79.066 77.9902794653706 621 112 75 13 202 819 512 1117 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g698000v5), mRNA blastn 64186 411 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9650440 9650440 PRJNA743294_P_NODE_26468_length_321_cov_1.556452_g26012_i0 PRJNA743294 26468 321 1.556452 4.99621092 Coccomyxa subellipsoidea 248742 Plants Plants 189 2.2e-43   NTclustered gi|545354429|ref|XM_005642992.1| 574566 g26012 i0 79.63 3.5607476635514 270 49 83 5 55 321 1071 805 Coccomyxa subellipsoidea C-169 T-complex protein 1 beta subunit mRNA blastn 1143 189 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
10127028 10127028 PRJNA743294_P_NODE_448_length_1695_cov_13.937731_g345_i0 PRJNA743294 448 1695 13.937731 236.24454045 Eukaryota 2759 Plants Plants 819 0   NTclustered gi|1861356233|gb|MT377344.1| 51329 g345 i0 83.446 66.1740412979351 888 139 52 6 251 1131 1364 478 Polytomella parva clone 0016303185 chain x, ATP synthase subunit beta (ATP5F1B) mRNA, complete cds; plastid blastn 112165 819 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
17776078 17776078 PRJNA743294_P_NODE_46314_length_253_cov_0.866667_g45858_i0 PRJNA743294 46314 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 220 5.95e-53   NTclustered gi|552823638|ref|XM_005846342.1| 554065 g45858 i0 83.691 91.2687747035573 233 38 92 0 9 241 2075 1843 Chlorella variabilis hypothetical protein (CHLNCDRAFT_56212) mRNA, complete cds blastn 23091 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
18573745 18573745 PRJNA743294_P_NODE_31575_length_297_cov_1.392857_g31119_i0 PRJNA743294 31575 297 1.392857 4.13678529 Dunaliella salina 3046 Plants Plants 187 7.249999999999999e-43   NTclustered gi|1609558611|gb|MH021100.1| 3046 g31119 i0 81.148 6.67676767676768 244 37 81 9 12 251 1272 1034 Dunaliella salina heat shock protein 70C (HSP70C) mRNA, complete cds blastn 1983 187 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
19050052 19050052 PRJNA743294_P_NODE_15635_length_406_cov_1.837838_g15179_i0 PRJNA743294 15635 406 1.837838 7.46162228 Eukaryota 2759 Plants Plants 268 3.55e-67   NTclustered gi|28193497|emb|AJ439528.1| 37502 g15179 i0 80.392 82.4679802955665 357 66 87 4 2 356 241 595 Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein s5 (rs5 gene) blastn 33482 268 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
19849113 19849113 PRJNA743294_P_NODE_41156_length_265_cov_3.416667_g40700_i0 PRJNA743294 41156 265 3.416667 9.05416755 Chlamydomonas incerta 51695 Plants Plants 113 1.1e-20   NTclustered gi|74272608|gb|DQ122869.1| 51695 g40700 i0 84.348 1.86415094339623 115 18 43 0 15 129 631 517 Chlamydomonas incerta 40S ribosomal protein S8 mRNA, complete cds blastn 494 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
19849153 19849153 PRJNA743294_P_NODE_46436_length_253_cov_0.866667_g45980_i0 PRJNA743294 46436 253 0.866667 2.19266751 Coccomyxa subellipsoidea 248742 Plants Plants 147 1.02e-30   NTclustered gi|545366965|ref|XM_005648296.1| 574566 g45980 i0 84.459 3.68774703557312 148 23 58 0 1 148 294 147 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 933 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
23675011 23675011 PRJNA743294_P_NODE_28779_length_309_cov_3.292373_g28323_i0 PRJNA743294 28779 309 3.292373 10.17343257 Edaphochlamys debaryana 47281 Plants Plants 58.4 6.2e-4   NTclustered gi|2089724543|gb|MZ446937.1| 47281 g28323 i0 97.059 0.110032362459547 34 1 11 0 163 196 1383 1350 Edaphochlamys debaryana strain SAG 70.81 pumilio family protein mRNA, partial cds blastn 34 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
23675024 23675024 PRJNA743294_P_NODE_30799_length_300_cov_2.317181_g30343_i0 PRJNA743294 30799 300 2.317181 6.951543 Trebouxia sp. SL0000003 3350044 Plants Plants 52.8 0.028   NTclustered gi|2917929621|emb|OZ234909.1| 3350044 g30343 i0 100 0.0933333333333333 28 0 9 0 3 30 710614 710641 Trebouxia sp. SL0000003 genome assembly, chromosome: 4 blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
24948365 24948365 PRJNA743294_P_NODE_12140_length_457_cov_1.765625_g11684_i0 PRJNA743294 12140 457 1.765625 8.06890625 Gonium viridistellatum 51704 Plants Plants 58.4 0.001   NTclustered gi|2089720597|gb|MZ444968.1| 51704 g11684 i0 97.059 0.218818380743982 34 1 7 0 144 177 873 840 Gonium viridistellatum strain NIES-654 hypothetical protein mRNA, partial cds blastn 100 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium viridistellatum
24948566 24948566 PRJNA743294_P_NODE_37080_length_277_cov_4.867647_g36624_i0 PRJNA743294 37080 277 4.867647 13.48338219 Monoraphidium neglectum 145388 Plants Plants 165 3.14e-36   NTclustered gi|926777351|ref|XM_014041696.1| 145388 g36624 i0 82.383 10.9747292418773 193 30 69 4 48 238 191 1 Monoraphidium neglectum 60S ribosomal protein L38 mRNA blastn 3040 165 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
24948579 24948579 PRJNA743294_P_NODE_39560_length_270_cov_1.583756_g39104_i0 PRJNA743294 39560 270 1.583756 4.2761412 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.025   NTclustered gi|2082246000|ref|XM_043062203.1| 3055 g39104 i0 96.875 0.118518518518519 32 0 12 1 188 219 383 353 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_05g234600v5), mRNA blastn 32 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24948668 24948668 PRJNA743294_P_NODE_54880_length_243_cov_3.500000_g54424_i0 PRJNA743294 54880 243 3.5 8.505 Chlorella variabilis 554065 Plants Plants 150 7.55e-32   NTclustered gi|552836115|ref|XM_005849031.1| 554065 g54424 i0 89.167 5.21810699588477 120 13 49 0 15 134 2356 2475 Chlorella variabilis hypothetical protein (CHLNCDRAFT_34870) mRNA, complete cds blastn 1268 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;