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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA743294" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 9 ✖

bioproject 1

  • PRJNA743294 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1198277 1198277 PRJNA743294_P_NODE_13461_length_435_cov_4.477901_g13005_i0 PRJNA743294 13461 435 4.477901 19.47886935 Methanosarcina 2207 Archaea Archaea 732 0   NTclustered gi|2047643091|dbj|AP019780.1| 2209 g13005 i0 97.011 223.76091954023 435 13 100 0 1 435 2736599 2737033 Methanosarcina mazei TMA DNA, complete genome blastn 97336 732 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
1198313 1198313 PRJNA743294_P_NODE_33481_length_290_cov_1.142857_g33025_i0 PRJNA743294 33481 290 1.142857 3.3142853 Methanosarcina 2207 Archaea Archaea 52.8 0.027   NTclustered gi|805394978|gb|CP009524.1| 1434099 g33025 i0 91.892 0.255172413793103 37 3 13 0 104 140 3968026 3967990 Methanosarcina sp. Kolksee, complete genome blastn 74 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. Kolksee
8851317 8851317 PRJNA743294_P_NODE_18447_length_376_cov_3.029703_g17991_i0 PRJNA743294 18447 376 3.029703 11.39168328 Methanosarcina 2207 Archaea Archaea 628 1.2999999999999994e-175   NTclustered gi|805339246|gb|CP009504.1| 1434102 g17991 i0 97.059 228.186170212766 374 10 99 1 3 376 43940 43568 Methanosarcina sp. WH1, complete genome blastn 85798 628 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. WH1
10126985 10126985 PRJNA743294_P_NODE_13788_length_430_cov_3.546218_g13332_i0 PRJNA743294 13788 430 3.546218 15.2487374 Methanosarcina 2207 Archaea Archaea 580 4.2799999999999996e-161   NTclustered gi|1491786200|gb|CP032683.1| 1715806 g13332 i0 96.839 185 348 10 100 1 83 430 464014 463668 Methanosarcina flavescens strain E03.2 chromosome, complete genome blastn 79550 580 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina flavescens
12677926 12677926 PRJNA743294_P_NODE_32970_length_291_cov_3.330275_g32514_i0 PRJNA743294 32970 291 3.330275 9.69110025 Methanosarcina 2207 Archaea Archaea 499 8.01e-137   NTclustered gi|805384997|gb|CP009517.1| 1434107 g32514 i0 97.595 213.838487972509 291 7 100 0 1 291 56203 56493 Methanosarcina barkeri 3, complete genome blastn 62227 499 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
13952262 13952262 PRJNA743294_P_NODE_28611_length_310_cov_2.341772_g28155_i0 PRJNA743294 28611 310 2.341772 7.2594932 root 1 Root_unresolved Root_unresolved 573 4.999999999999998e-159   NTclustered gi|1808683266|gb|MT052672.1| 2213 g28155 i0 100 100 310 0 100 0 1 310 344 653 Methanosarcina sp. strain WLC-01 16S ribosomal RNA gene, partial sequence blastn 31000 573 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
14750987 14750987 PRJNA743294_P_NODE_37752_length_275_cov_2.970297_g37296_i0 PRJNA743294 37752 275 2.970297 8.16831675 Methanosarcina sp. MTP4 1434100 Archaea Archaea 243 1.4000000000000001e-59   NTclustered gi|805342629|gb|CP009505.1| 1434100 g37296 i0 82.847 51.1018181818182 274 43 99 4 2 273 3650033 3650304 Methanosarcina sp. MTP4, complete genome blastn 14053 243 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
19849140 19849140 PRJNA743294_P_NODE_44676_length_256_cov_2.934426_g44220_i0 PRJNA743294 44676 256 2.934426 7.51213056 Methanosarcina siciliae 38027 Archaea Archaea 159 1.33e-34   NTclustered gi|805346097|gb|CP009506.1| 1434120 g44220 i0 79.008 2.609375 262 34 100 11 1 256 458725 458971 Methanosarcina siciliae T4/M, complete genome blastn 668 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
21600551 21600551 PRJNA743294_P_NODE_59817_length_223_cov_4.313333_g59361_i0 PRJNA743294 59817 223 4.313333 9.61873259 root 1 Root_unresolved Root_unresolved 399 6.139999999999999e-107   NTclustered gi|313766567|gb|HQ591417.1| 2208 g59361 i0 99.099 113.511210762332 222 2 99 0 2 223 1105 884 Methanosarcina barkeri strain TR-Z13 16S ribosomal RNA gene, partial sequence blastn 25313 399 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;